RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ARNT2Q9HBZ2 717 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 CNOT6Q9ULM6 557 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPR34Q9UPC5 381 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 ZNF148Q9UQR1 794 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 PKP3Q9Y446 797 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 C2orf81A6NN90 581 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 ERI2A8K979 691 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPR89AB7ZAQ6 455 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 KIF5CO60282 957 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 METTL18O95568 372 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 ASMTLO95671 621 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 CRTAMO95727 393 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 AP2A1O95782 977 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 FUCA1P04066 466 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPR89BP0CG08 455 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 SPINK2P20155 84 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 FDFT1P37268 417 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 POLD2P49005 469 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 ITGA9Q13797 1035 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GSE1Q14687 1217 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 TAF1AQ15573 450 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 TRIM74Q86UV6 250 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GALNT13Q8IUC8 556 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCDC89Q8N998 374 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 KYQ8NBH2 561 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 OR6C4Q8NGE1 309 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 BRSK1Q8TDC3 778 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GLYATL1Q969I3 302 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 PBKQ96KB5 322 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 IL17CQ9P0M4 197 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 TMEM98Q9Y2Y6 226 aa10.57□□□□□ -0.72
CDC42SE1-206ENST00000492796 GLYATL1P3A0A0U1RQE8 302 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 STX7O15400 261 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 CEP104O60308 925 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 DNAJC6O75061 913 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 SLC25A14O95258 325 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 IFNB1P01574 187 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 ATP1A1P05023 1023 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 LPOP22079 712 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 CXCR5P32302 372 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 ADCY8P40145 1251 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 CTBSQ01459 385 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 OLIG2Q13516 323 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 TCEA2Q15560 299 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 LONRF2Q1L5Z9 754 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 GUSBP11Q6P575 273 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 OGFOD3Q6PK18 319 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 C4orf22Q6V702 233 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCNI2Q6ZMN8 369 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 EFL1Q7Z2Z2 1120 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 LINC00523Q86TU6 105 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 NRROSQ86YC3 692 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 SLC35F6Q8N357 371 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 RASGEF1CQ8N431 466 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 FAM46DQ8NEK8 389 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPR156Q8NFN8 814 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 WDR48Q8TAF3 677 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 NAP1L3Q99457 506 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 APOL2Q9BQE5 337 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 TRIM39Q9HCM9 518 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 BPIFA1Q9NP55 256 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 IL26Q9NPH9 171 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 SIRPGQ9P1W8 387 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 PAK5Q9P286 719 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 TTC7AQ9ULT0 858 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 PADI4Q9UM07 663 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 OAS3Q9Y6K5 1087 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-206ENST00000492796 MYLKQ15746 1914 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 CPED1A4D0V7 1026 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 B4DGG1 531 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 CES2O00748 559 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 VEGFDO43915 354 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 NUAK1O60285 661 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 OPA1O60313 960 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 NOBOXO60393 691 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 USP12O75317 370 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 MYF5P13349 255 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 PNLIPP16233 465 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 HADHAP40939 763 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCDC173Q0VFZ6 552 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 MSLNQ13421 630 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 SEMA5AQ13591 1074 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 SNX1Q13596 522 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 SPARCL1Q14515 664 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 ATP13A5Q4VNC0 1218 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 C14orf28Q4W4Y0 310 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 DENND5AQ6IQ26 1287 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 UNQ6494/PRO21346Q6UXR6 183 aa10.55□□□□□ -0.72
CDC42SE1-206ENST00000492796 MARK2Q7KZI7 788 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms