RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 TMEM159Q96B96 161 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 RNF25Q96BH1 459 aaPredicted RBP17.13■□□□□ 0.33
SGMS1-204ENST00000492601 AGAP3Q96P47 875 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 LYSMD1Q96S90 227 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 CCNL2Q96S94 520 aaPredicted RBP17.13■□□□□ 0.33
SGMS1-204ENST00000492601 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 PKD2L2Q9NZM6 624 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 FOXJ2Q9P0K8 574 aa17.13■□□□□ 0.33
SGMS1-204ENST00000492601 CNOT6Q9ULM6 557 aaKnown RBP17.13■□□□□ 0.33
SGMS1-204ENST00000492601 IGHV5-10-1A0A0J9YXX1 117 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 FADS2P1A8MWK0 482 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 NVLO15381 856 aaKnown RBP17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ZW10O43264 779 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 MTA2O94776 668 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 CCL4P13236 92 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 GPR3P46089 330 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 PPM1FP49593 454 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-204ENST00000492601 CFHR1Q03591 330 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 SRSF6Q13247 344 aaKnown RBP17.12■□□□□ 0.33
SGMS1-204ENST00000492601 PDK1Q15118 436 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ODF2Q5BJF6 829 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 CHST15Q7LFX5 561 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-204ENST00000492601 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ZFAND4Q86XD8 727 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 RHOT2Q8IXI1 618 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ZNF843Q8N446 348 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 CCDC74BQ96LY2 380 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 ADGRE3Q9BY15 652 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 BRD8Q9H0E9 1235 aa17.12■□□□□ 0.33
SGMS1-204ENST00000492601 IGHV1OR21-1A0A087WYE8 117 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 EFSO43281 561 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 DNAJC6O75061 913 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 EML2O95834 649 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 SLC4A1P02730 911 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 PIRTP0C851 137 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 MPSTP25325 297 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 LRP8Q14114 963 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 LY6DQ14210 128 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 PCSK7Q16549 785 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
SGMS1-204ENST00000492601 ALS2CLQ60I27 953 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 NT5DC3Q86UY8 548 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 RAVER1Q8IY67 606 aaKnown RBP17.11■□□□□ 0.33
SGMS1-204ENST00000492601 SLC37A2Q8TED4 501 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 TTC9Q92623 222 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 IMP4Q96G21 291 aaKnown RBP17.11■□□□□ 0.33
SGMS1-204ENST00000492601 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 ARFGAP3Q9NP61 516 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 KCNK4Q9NYG8 393 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 AKAP7Q9P0M2 348 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-204ENST00000492601 VPS18Q9P253 973 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 ACSL6Q9UKU0 697 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 SHOC2Q9UQ13 582 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
SGMS1-204ENST00000492601 C9orf172C9J069 976 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 PPP1R12AO14974 1030 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-204ENST00000492601 SPOPO43791 374 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 LIPCP11150 499 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 ZFXP17010 805 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-204ENST00000492601 CSF2RBP32927 897 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
SGMS1-204ENST00000492601 LIMK2P53671 638 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 LLGL1Q15334 1064 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 MFSD7Q6UXD7 560 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 VASH2Q86V25 355 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 VSIG1Q86XK7 387 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 RHOT1Q8IXI2 618 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 EID2BQ96D98 161 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 TRIB3Q96RU7 358 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 SLC38A3Q99624 504 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 SPATA16Q9BXB7 569 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 SEMA4CQ9C0C4 833 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 ZFYVE1Q9HBF4 777 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 TMEM9Q9P0T7 183 aa17.1■□□□□ 0.33
SGMS1-204ENST00000492601 ZNF106Q9H2Y7 1883 aaKnown RBP17.1■□□□□ 0.33
SGMS1-204ENST00000492601 RGSL1A5PLK6 1076 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 SNX2O60749 519 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 ACP5P13686 325 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 COMTP21964 271 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 CLPPQ16740 277 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-204ENST00000492601 ZNF648Q5T619 568 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-204ENST00000492601 CNGA4Q8IV77 575 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 SFRP1Q8N474 314 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 GPR26Q8NDV2 337 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 OR4D9Q8NGE8 314 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 WBP1Q96G27 269 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 SLC25A51Q9H1U9 297 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
SGMS1-204ENST00000492601 SAE1Q9UBE0 346 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-204ENST00000492601 TBC1D29Q9UFV1 150 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 BOD1L1Q8NFC6 3051 aa17.09■□□□□ 0.33
SGMS1-204ENST00000492601 TLN1Q9Y490 2541 aaKnown RBP17.08■□□□□ 0.33
SGMS1-204ENST00000492601 AKR1B15C9JRZ8 316 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-204ENST00000492601 HGSO14964 777 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-204ENST00000492601 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-204ENST00000492601 SLC1A1P43005 524 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms