RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 PDZK1P1A8MUH7 402 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 PGLSO95336 258 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 GLP2RO95838 553 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 GTF2E2P29084 291 aaKnown RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 TKTP29401 623 aaKnown RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 OR4D2P58180 307 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 FKBP1AP62942 108 aaKnown RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 TRAF3Q13114 568 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 EPHX4Q8IUS5 362 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 OR10A6Q8NH74 314 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 ZNF420Q8TAQ5 688 aaPredicted RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 HSFY1Q96LI6 401 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 HNRNPABQ99729 332 aaKnown RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 SEZ6LQ9BYH1 1024 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 WDR12Q9GZL7 423 aaKnown RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 GLOD4Q9HC38 313 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 ACTR3BQ9P1U1 418 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 LEF1Q9UJU2 399 aaPredicted RBP9.79□□□□□ -0.84
ERCC3-208ENST00000491292 TCAF1Q9Y4C2 921 aa9.79□□□□□ -0.84
ERCC3-208ENST00000491292 SHANK3Q9BYB0 1731 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 COL14A1Q05707 1796 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TRIP11Q15643 1979 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SOWAHBA6NEL2 793 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 MGEA5O60502 916 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SOAT2O75908 522 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 DIRAS1O95057 198 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ANGPTL1O95841 491 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 GPIP06744 558 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SHMT2P34897 504 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TARBP2Q15633 366 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CYS1Q717R9 158 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 MIB1Q86YT6 1006 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 EID3Q8N140 333 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 UBE2J2Q8N2K1 259 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SLC10A4Q96EP9 437 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 B3GALT6Q96L58 329 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 COLEC11Q9BWP8 271 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CD320Q9NPF0 282 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CNGB3Q9NQW8 809 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 NDFIP2Q9NV92 336 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TUBA8Q9NY65 449 aaPredicted RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TMED5Q9Y3A6 229 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CPQQ9Y646 472 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 PABPN1LA6NDY0 278 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SH3BGRLO75368 114 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 UGT2B4P06133 528 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CCDC159P0C7I6 412 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 PABPC1P11940 636 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 POLR2JP52435 117 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ARSFP54793 590 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 MTA1Q13330 715 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 DAG1Q14118 895 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SF3B4Q15427 424 aaKnown RBP eCLIP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 FSCN1Q16658 493 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ANKRD34AQ69YU3 496 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TBPL2Q6SJ96 375 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CATSPERGQ6ZRH7 1159 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 DNERQ8NFT8 737 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ROPN1LQ96C74 230 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 NSMCE3Q96MG7 304 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SPATC1LQ9H0A9 340 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ELP3Q9H9T3 547 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 RIC8BQ9NVN3 520 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 VPS28Q9UK41 221 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 GIT1Q9Y2X7 761 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ANXA6P08133 673 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SLC6A2P23975 617 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 IDUAP35475 653 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 POLR2IP36954 125 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 HLCSP50747 726 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 NCS1P62166 190 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ZNF235Q14590 738 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 SLC36A3Q495N2 470 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 AHSA2Q719I0 299 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ADGRG5Q8IZF4 528 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 FAR1Q8WVX9 515 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 DEPDC7Q96QD5 511 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 MYOCQ99972 504 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 NACA2Q9H009 215 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 CAB39Q9Y376 341 aaPredicted RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 FAM32AQ9Y421 112 aaKnown RBP9.78□□□□□ -0.84
ERCC3-208ENST00000491292 TAF1LQ8IZX4 1826 aa9.78□□□□□ -0.84
ERCC3-208ENST00000491292 LTBP4Q8N2S1 1624 aa9.77□□□□□ -0.84
ERCC3-208ENST00000491292 MOXD2PA6NHM9 499 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 C19orf81C9J6K1 198 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 AQP9O43315 295 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 ABCB7O75027 752 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 GABBR2O75899 941 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 RASAL1O95294 804 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 ALDOCP09972 364 aaKnown RBP9.77□□□□□ -0.85
ERCC3-208ENST00000491292 SLC2A3P11169 496 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 PAX3P23760 479 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 AZGP1P25311 298 aaKnown RBP9.77□□□□□ -0.85
ERCC3-208ENST00000491292 RFC2P35250 354 aa9.77□□□□□ -0.85
ERCC3-208ENST00000491292 SERPINH1P50454 418 aaKnown RBP9.77□□□□□ -0.85
ERCC3-208ENST00000491292 SH3BP2P78314 561 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms