RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CCDC170Q8IYT3 715 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 TEKT5Q96M29 485 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 UBL7Q96S82 380 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-219ENST00000491183 SEMA6CQ9H3T2 930 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 ZFYVE1Q9HBF4 777 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 RDH14Q9HBH5 336 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 CPNE5Q9HCH3 593 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 MAGEE1Q9HCI5 957 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 VPS18Q9P253 973 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 ZNHIT2Q9UHR6 403 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 SHOC2Q9UQ13 582 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 PRKAB1Q9Y478 270 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 BPTFQ12830 3046 aa17.86■□□□□ 0.45
HMGN1-219ENST00000491183 TRBV23OR9-2A0A075B6M9 112 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 CD1CP29017 333 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 MARCKSL1P49006 195 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 SLC14A2Q15849 920 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 AMZ1Q400G9 498 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 BROXQ5VW32 411 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 BZW1Q7L1Q6 419 aaKnown RBP17.85■□□□□ 0.45
HMGN1-219ENST00000491183 GPR26Q8NDV2 337 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 TFB1MQ8WVM0 346 aaKnown RBP17.85■□□□□ 0.45
HMGN1-219ENST00000491183 ANP32EQ9BTT0 268 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 RBSNQ9H1K0 784 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 LOXL2Q9Y4K0 774 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 PCDHGA7Q9Y5G6 932 aa17.85■□□□□ 0.45
HMGN1-219ENST00000491183 hCG_1818297A0A087WSY0 165 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 A0A0A6YYK5 440 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-219ENST00000491183 RCCD1A6NED2 376 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ZRANB2O95218 330 aaKnown RBP eCLIP17.84■□□□□ 0.45
HMGN1-219ENST00000491183 CPNE6O95741 557 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ITIH1P19827 911 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 SLC5A2P31639 672 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ETV5P41161 510 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 GPR3P46089 330 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ZNF75DP51815 510 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 CLN3Q13286 438 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 PEX6Q13608 980 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 LRP8Q14114 963 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 TFDP3Q5H9I0 405 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ZNF648Q5T619 568 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-219ENST00000491183 CHST15Q7LFX5 561 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-219ENST00000491183 PIM3Q86V86 326 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 KATNAL2Q8IYT4 538 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 RCOR2Q8IZ40 523 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 KRT35Q92764 455 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 CCDC97Q96F63 343 aaPredicted RBP17.84■□□□□ 0.45
HMGN1-219ENST00000491183 NUDT22Q9BRQ3 303 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 UBP1Q9NZI7 540 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ATXN10Q9UBB4 475 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 PISDQ9UG56 409 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 ZNF711Q9Y462 761 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 SPO11Q9Y5K1 396 aa17.84■□□□□ 0.45
HMGN1-219ENST00000491183 TEX51A0A1B0GUA7 166 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 AURKAO14965 403 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 PMPCBO75439 489 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 NDST3O95803 873 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 JMJD7P0C870 316 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 TMPRSS3P57727 454 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 CFHR1Q03591 330 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 C16orf72Q14CZ0 275 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 SPA17Q15506 151 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 MAP9Q49MG5 647 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 PHF19Q5T6S3 580 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 NKAIN2Q5VXU1 208 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 ALS2CLQ60I27 953 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 C11orf63Q6NUN7 778 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 ZC3H18Q86VM9 953 aaKnown RBP17.83■□□□□ 0.44
HMGN1-219ENST00000491183 SLC37A2Q8TED4 501 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 P3H4Q92791 437 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 RMI1Q9H9A7 625 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 ARFGAP3Q9NP61 516 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 TBC1D29Q9UFV1 150 aa17.83■□□□□ 0.44
HMGN1-219ENST00000491183 EPN1Q9Y6I3 576 aaPredicted RBP17.83■□□□□ 0.44
HMGN1-219ENST00000491183 IGHV1OR21-1A0A087WYE8 117 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 IGHV5-10-1A0A0J9YXX1 117 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 LOC285095A0A1B0GVY8 99 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 SOWAHDA6NJG2 315 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 ATXN7O15265 892 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-219ENST00000491183 NUAK1O60285 661 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 ZNF8P17098 575 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-219ENST00000491183 BPIP17213 487 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 NFKB1P19838 968 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 FECHP22830 423 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 CYLC1P35663 651 aaPredicted RBP17.82■□□□□ 0.44
HMGN1-219ENST00000491183 UCNP55089 124 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 DCDC1P59894 354 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 BIRC2Q13490 618 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 SQSTM1Q13501 440 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 NOMO1Q15155 1222 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 ARHGAP40Q5TG30 622 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 PCSK4Q6UW60 755 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 KDELC1Q6UW63 502 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 JAMLQ86YT9 394 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 SFRP1Q8N474 314 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 TMEM159Q96B96 161 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 HAUS1Q96CS2 278 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 MRFAP1L1Q96HT8 127 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 PANX2Q96RD6 677 aa17.82■□□□□ 0.44
HMGN1-219ENST00000491183 CMKLR1Q99788 373 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms