RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ABCG8	Q9H221	673 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	DPH5	Q9H2P9	285 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	MUC13	Q9H3R2	512 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	TASP1	Q9H6P5	420 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	C17orf75	Q9HAS0	396 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	THSD1	Q9NS62	852 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	ANO10	Q9NW15	660 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	TMEM51	Q9NW97	253 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	HCFC1R1	Q9NWW0	138 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	NMRK1	Q9NWW6	199 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	DDX43	Q9NXZ2	648 aa	Known RBP	2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	TAS2R10	Q9NYW0	307 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	SELENON	Q9NZV5	590 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	COX16	Q9P0S2	106 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	UPB1	Q9UBR1	384 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	CLIP2	Q9UDT6	1046 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	TSPYL4	Q9UJ04	414 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	CORO1C	Q9ULV4	474 aa	Predicted RBP	2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	HSF4	Q9ULV5	492 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	NAALADL1	Q9UQQ1	740 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	OSGIN2	Q9Y236	505 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	PIN4	Q9Y237	131 aa	Known RBP	2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	WDR37	Q9Y2I8	494 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	SESN1	Q9Y6P5	492 aa		2.59	□□□□□ -1.99
PUM3-204	ENST00000490444	SPAG9	O60271	1321 aa	Known RBP	2.59	□□□□□ -2
PUM3-204	ENST00000490444	ATP8B3	O60423	1300 aa		2.59	□□□□□ -2
PUM3-204	ENST00000490444	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	2.59	□□□□□ -2
PUM3-204	ENST00000490444	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	2.59	□□□□□ -2
PUM3-204	ENST00000490444	GOLGA6L10	A0A0M3HER8	536 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444		A0A1W2PRV1	198 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	SYCE3	A1L190	88 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444		A4D1N5	150 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LRRIQ4	A6NIV6	560 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LACTBL1	A8MY62	500 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444		H0YCG3	227 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	KIF2A	O00139	706 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	RHOD	O00212	210 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TSPAN4	O14817	238 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ZNF263	O14978	683 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	MAGEB3	O15480	346 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	PRPF4	O43172	522 aa	Known RBP eCLIP	2.58	□□□□□ -2	6e-6	■■□□□ 11.6
PUM3-204	ENST00000490444	KLK10	O43240	276 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	BCAS2	O75934	225 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	CAMTA2	O94983	1202 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	CSPG5	O95196	566 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TRIM16	O95361	564 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	STAMBP	O95630	424 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	DDAH2	O95865	285 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	F9	P00740	461 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LCK	P06239	509 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TPM3	P06753	285 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TPM1	P09493	284 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	RHOXF2B	P0C7M4	288 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	GHR	P10912	638 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	UBL4A	P11441	157 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	CYP4B1	P13584	511 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	PRG2	P13727	222 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	FDPS	P14324	419 aa	Known RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	CPA1	P15085	419 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TYMP	P19971	482 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TM4SF1	P30408	202 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ADSS	P30520	456 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	GJC1	P36383	396 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	IL15	P40933	162 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	ACAA2	P42765	397 aa	Known RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	ME1	P48163	572 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	PIP4K2A	P48426	406 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	CENPA	P49450	140 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	HTR6	P50406	440 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ETV1	P50549	477 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	RPS6KA3	P51812	740 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LUM	P51884	338 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	STARD6	P59095	220 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ACTR1A	P61163	376 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	KCNJ10	P78508	379 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ARF5	P84085	180 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	RUNX1T1	Q06455	604 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	GABPB1	Q06547	395 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	SCN1B	Q07699	218 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	SLC20A2	Q08357	652 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	TNFAIP1	Q13829	316 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	MXD4	Q14582	209 aa	Predicted RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	ODF3L2	Q3SX64	289 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LEXM	Q3ZCV2	418 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	C9orf152	Q5JTZ5	239 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	DNTTIP2	Q5QJE6	756 aa	Known RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	SH2D4B	Q5SQS7	431 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	PLEKHS1	Q5SXH7	462 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	CCDC122	Q5T0U0	273 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	NAA35	Q5VZE5	725 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	AP1AR	Q63HQ0	302 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ADAL	Q6DHV7	355 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	GJB7	Q6PEY0	223 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ISLR2	Q6UXK2	745 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	LRIG3	Q6UXM1	1119 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	PPP1R21	Q6ZMI0	780 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	ZNF793	Q6ZN11	406 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	C9orf47	Q6ZRZ4	202 aa		2.58	□□□□□ -2
PUM3-204	ENST00000490444	C15orf52	Q6ZUT6	534 aa	Known RBP	2.58	□□□□□ -2
PUM3-204	ENST00000490444	LRRC8D	Q7L1W4	858 aa		2.58	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms