RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 EFR3BQ9Y2G0 817 aa19.61■□□□□ 0.73
SMC4-222ENST00000490207 PLEKHM1Q9Y4G2 1056 aa19.61■□□□□ 0.73
SMC4-222ENST00000490207 OAS3Q9Y6K5 1087 aaKnown RBP19.61■□□□□ 0.73
SMC4-222ENST00000490207 CELSR3Q9NYQ7 3312 aa19.61■□□□□ 0.73
SMC4-222ENST00000490207 KIF26BQ2KJY2 2108 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 A0A087WV48 116 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 A0A1W2PQM1 296 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 NUDT21O43809 227 aaKnown RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 ATP1A1P05023 1023 aaKnown RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 FGF1P05230 155 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 CETN2P41208 172 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 LSSP48449 732 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 WNT3AP56704 352 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 OTUD4Q01804 1114 aaKnown RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 KIF5AQ12840 1032 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 COL28A1Q2UY09 1125 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 TMC3Q7Z5M5 1100 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 SPRED1Q7Z699 444 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 CDKL3Q8IVW4 592 aaPredicted RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 LSMEM2Q8N112 164 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 Q8N9G6 341 aaPredicted RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 GPR26Q8NDV2 337 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 ACTL9Q8TC94 416 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 HNRNPLLQ8WVV9 542 aaKnown RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 ZNF578Q96N58 590 aaPredicted RBP19.6■□□□□ 0.73
SMC4-222ENST00000490207 FERMT1Q9BQL6 677 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 TRIM10Q9UDY6 481 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 RSPH14Q9UHP6 348 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 AMFRQ9UKV5 643 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 SPO11Q9Y5K1 396 aa19.6■□□□□ 0.73
SMC4-222ENST00000490207 URB1O60287 2271 aaKnown RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 DNAJC6O75061 913 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 DXOO77932 396 aaKnown RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 RBL1P28749 1068 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 EIF2S3P41091 472 aaKnown RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 MPP3Q13368 585 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 LRP8Q14114 963 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 PEX26Q7Z412 305 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 C17orf82Q86X59 251 aaPredicted RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 SYCE1Q8N0S2 351 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 IPMKQ8NFU5 416 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 ALG3Q92685 438 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 FGF11Q92914 225 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 OXNAD1Q96HP4 312 aaPredicted RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 MRGPRX2Q96LB1 330 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 ZSCAN5AQ9BUG6 496 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 GBA3Q9H227 469 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 C10orf88Q9H8K7 445 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 RALYQ9UKM9 306 aaKnown RBP19.59■□□□□ 0.73
SMC4-222ENST00000490207 TRHDEQ9UKU6 1024 aa19.59■□□□□ 0.73
SMC4-222ENST00000490207 CHD6Q8TD26 2715 aa19.58■□□□□ 0.73
SMC4-222ENST00000490207 CCDC187A0A096LP49 1063 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 A0A0U1RQJ8 604 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 LOC285095A0A1B0GVY8 99 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 A0A1W2PNU3 283 aaPredicted RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 RRP8O43159 456 aaKnown RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 ECEL1O95672 775 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 ABCG1P45844 678 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 EIF3EP60228 445 aaKnown RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 BIRC2Q13490 618 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 SIRPB2Q5JXA9 342 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 ITPRIPL1Q6GPH6 555 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 AADACL2Q6P093 401 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 LRRC69Q6ZNQ3 347 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 B3GNT8Q7Z7M8 397 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 NAGSQ8N159 534 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 SLC25A41Q8N5S1 370 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 TRAM1L1Q8N609 369 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 UBL4BQ8N7F7 174 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 WDR36Q8NI36 951 aaKnown RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 PATE1Q8WXA2 126 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 LIN37Q96GY3 246 aaPredicted RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 RMI1Q9H9A7 625 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 EPB41L5Q9HCM4 733 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 ZNHIT2Q9UHR6 403 aa19.58■□□□□ 0.72
SMC4-222ENST00000490207 PCYT1BQ9Y5K3 369 aaPredicted RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 ZNF106Q9H2Y7 1883 aaKnown RBP19.58■□□□□ 0.72
SMC4-222ENST00000490207 RHPN2P1A8MT19 583 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 AURKAO14965 403 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 TJP3O95049 919 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 PYGMP11217 842 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 BPIP17213 487 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 HLA-DPA1P20036 260 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 CHRNA4P43681 627 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 INHBCP55103 352 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 PCBP4P57723 403 aaKnown RBP19.57■□□□□ 0.72
SMC4-222ENST00000490207 PDPK2PQ6A1A2 396 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 FOXR1Q6PIV2 292 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 IGF2-ASQ6U949 168 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 CHST15Q7LFX5 561 aaPredicted RBP19.57■□□□□ 0.72
SMC4-222ENST00000490207 ZNF438Q7Z4V0 828 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 ARL14Q8N4G2 192 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 TMEM74Q96NL1 305 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 FAM118BQ9BPY3 351 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 FSD1LQ9BXM9 530 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 FOXP3Q9BZS1 431 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 STRADBQ9C0K7 418 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 CARD9Q9H257 536 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 TRABDQ9H4I3 376 aa19.57■□□□□ 0.72
SMC4-222ENST00000490207 ASCL3Q9NQ33 180 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms