RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 TRPM8Q7Z2W7 1104 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 VPS36Q86VN1 386 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 HOOK3Q86VS8 718 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 TP53INP2Q8IXH6 220 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 KIRREL3Q8IZU9 778 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 AGGF1Q8N302 714 aaeCLIP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 SLC25A45Q8N413 288 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 PCDH20Q8N6Y1 951 aaKnown RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 MFSD2AQ8NA29 543 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 ZNF548Q8NEK5 533 aaPredicted RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 FBF1Q8TES7 1133 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 ARHGEF2Q92974 986 aaKnown RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 SKA1Q96BD8 255 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 KLHDC7BQ96G42 594 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 PPP1R16AQ96I34 528 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 KLHL32Q96NJ5 620 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 PEBP4Q96S96 227 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 HEPHQ9BQS7 1158 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 HDAC8Q9BY41 377 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 NSRP1Q9H0G5 558 aaKnown RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 FAIMQ9NVQ4 179 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 TMEM248Q9NWD8 314 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 PTTG2Q9NZH5 202 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 LIMA1Q9UHB6 759 aaKnown RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 KLF15Q9UIH9 416 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 PNMA8BQ9ULN7 279 aaPredicted RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 DMTF1Q9Y222 760 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 R3HDM2Q9Y2K5 976 aaKnown RBP5.84□□□□□ -1.47
CNOT9-207ENST00000489687 COQ6Q9Y2Z9 468 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 MFHAS1Q9Y4C4 1052 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 NFS1Q9Y697 457 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 U3KQA8 63 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 BSNQ9UPA5 3926 aa5.84□□□□□ -1.47
CNOT9-207ENST00000489687 ARHGEF17Q96PE2 2063 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 A0A1W2PQC6 194 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TCRBV5S1A1TA0A578 114 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 LRRC53A6NM62 1247 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RASA4BC9J798 803 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RASA4O43374 803 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TLX3O43711 291 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 KRT86O43790 486 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 IDH3BO43837 385 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 BRINP1O60477 761 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 MMP20O60882 483 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PIAS2O75928 621 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TJP3O95049 919 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PAK4O96013 591 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 MYZAPP0CAP1 466 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 GIMD1P0DJR0 217 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TPBGLP0DKB5 382 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RARAP10276 462 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 JUPP14923 745 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TCF4P15884 667 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 L1CAMP32004 1257 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 HNF1BP35680 557 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ETFBP38117 255 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RGRP47804 291 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 MAPKAPK2P49137 400 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PMS2P54278 862 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 WDR4P57081 412 aaKnown RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RHOAP61586 193 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 HPCAP84074 193 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 DAB2P98082 770 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 INSM1Q01101 510 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 GUCY1A3Q02108 690 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 C1orf61Q13536 156 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PDE1CQ14123 709 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 FZD2Q14332 565 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TLR1Q15399 786 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 CDKN3Q16667 212 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 SPRED3Q2MJR0 410 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 DEFB133Q30KQ1 61 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ARL13BQ3SXY8 428 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 CARD16Q5EG05 197 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 IL23RQ5VWK5 629 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 GUSBP11Q6P575 273 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 BORAQ6PGQ7 559 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 KYAT3Q6YP21 454 aaKnown RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ZNF783Q6ZMS7 281 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TRIM72Q6ZMU5 477 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 CEP128Q6ZU80 1094 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 STRADAQ7RTN6 431 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ABI3BPQ7Z7G0 1075 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PDZD3Q86UT5 571 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 IQCHQ86VS3 1027 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ZSWIM9Q86XI8 627 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 ZNF677Q86XU0 584 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 PHF13Q86YI8 300 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 CREG2Q8IUH2 290 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 NPWQ8N729 165 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 RTL3Q8N8U3 475 aaKnown RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 TMIEQ8NEW7 156 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 OR2AP1Q8NGE2 309 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 GDAP1Q8TB36 358 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
CNOT9-207ENST00000489687 CENPIQ92674 756 aaPredicted RBP5.83□□□□□ -1.48
CNOT9-207ENST00000489687 GRAMD1AQ96CP6 724 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms