RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 CDH6P55285 790 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 MYL5Q02045 173 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 LACTB2Q53H82 288 aaPredicted RBP16.82■□□□□ 0.28
TOP3B-217ENST00000489581 IYDQ6PHW0 289 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 CLEC18BQ6UXF7 455 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF765Q7L2R6 523 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 NLRP8Q86W28 1048 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 CLEC18CQ8NCF0 446 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 TRIT1Q9H3H1 467 aaKnown RBP16.82■□□□□ 0.28
TOP3B-217ENST00000489581 STN1Q9H668 368 aaKnown RBP16.82■□□□□ 0.28
TOP3B-217ENST00000489581 HAUS4Q9H6D7 363 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
TOP3B-217ENST00000489581 MAN2B2Q9Y2E5 1009 aa16.82■□□□□ 0.28
TOP3B-217ENST00000489581 A0A0J9YYE9 177 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 PRR19A6NJB7 356 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 POLR1CO15160 346 aaPredicted RBP16.81■□□□□ 0.28
TOP3B-217ENST00000489581 CLDN7O95471 211 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 DLGAP3O95886 979 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 TRBC1P01850 177 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 PYGLP06737 847 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 RARAP10276 462 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 ACP5P13686 325 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF30P17039 623 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 NR1D1P20393 614 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 PCK1P35558 622 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 STC1P52823 247 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 MC1RQ01726 317 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 BOLA3Q53S33 107 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 TXNRD3NBQ6F5E7 133 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF571Q7Z3V5 609 aaPredicted RBP16.81■□□□□ 0.28
TOP3B-217ENST00000489581 SLC9B2Q86UD5 537 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 SH3KBP1Q96B97 665 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 TBC1D10AQ9BXI6 508 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 CNOT6Q9ULM6 557 aaKnown RBP16.81■□□□□ 0.28
TOP3B-217ENST00000489581 CHKBQ9Y259 395 aa16.81■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF106Q9H2Y7 1883 aaKnown RBP16.81■□□□□ 0.28
TOP3B-217ENST00000489581 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 GZMAP12544 262 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 F8A1P23610 371 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 SERPINB6P35237 376 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 STAT5AP42229 794 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
TOP3B-217ENST00000489581 SEPT6Q14141 434 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 IHHQ14623 411 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 ASIC2Q16515 512 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 FAM26EQ8N5C1 309 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 TEX26Q8N6G2 289 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 WDR24Q96S15 920 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 HSD3B7Q9H2F3 369 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 VPS18Q9P253 973 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 MYO6Q9UM54 1294 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 TP53TG5Q9Y2B4 290 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 RPS6KL1Q9Y6S9 549 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 SCINQ9Y6U3 715 aa16.8■□□□□ 0.28
TOP3B-217ENST00000489581 NOTCH2Q04721 2471 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 TNRC6AQ8NDV7 1962 aaKnown RBP16.79■□□□□ 0.28
TOP3B-217ENST00000489581 A6NCN8 305 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.283e-21■□□□□ 11
TOP3B-217ENST00000489581 MTSS1O43312 755 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 EPHA4P54764 986 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 DSC2Q02487 901 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 FOXM1Q08050 763 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 KLRB1Q12918 225 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 LYSMD3Q7Z3D4 306 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 ESX1Q8N693 406 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 HERPUD2Q9BSE4 406 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.79■□□□□ 0.28
TOP3B-217ENST00000489581 ULBP3Q9BZM4 244 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
TOP3B-217ENST00000489581 PCDH18Q9HCL0 1135 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
TOP3B-217ENST00000489581 LMBRD1Q9NUN5 540 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 CPNE7Q9UBL6 633 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 TTLL3Q9Y4R7 772 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 KCNMB2Q9Y691 235 aa16.79■□□□□ 0.28
TOP3B-217ENST00000489581 NBPF19A0A087WUL8 3843 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 FADS2P1A8MWK0 482 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 K7EM74 188 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 PRLP01236 227 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 F3P13726 295 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 ZNF28P17035 718 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 GFERP55789 205 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 MMRN1Q13201 1228 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 CRTC2Q53ET0 693 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-217ENST00000489581 E4F1Q66K89 784 aaPredicted RBP16.78■□□□□ 0.28
TOP3B-217ENST00000489581 SASS6Q6UVJ0 657 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
TOP3B-217ENST00000489581 PLXDC1Q8IUK5 500 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 LPCAT1Q8NF37 534 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 MIB2Q96AX9 1013 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 PSMG3-AS1Q96PY0 264 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 PRDM8Q9NQV8 689 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 ANO10Q9NW15 660 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 SIDT1Q9NXL6 827 aaKnown RBP16.78■□□□□ 0.28
TOP3B-217ENST00000489581 KCTD3Q9Y597 815 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
TOP3B-217ENST00000489581 MED13Q9UHV7 2174 aa16.77■□□□□ 0.28
TOP3B-217ENST00000489581 KIR2DS5A0A0G2JLQ3 304 aa16.77■□□□□ 0.28
TOP3B-217ENST00000489581 A0A0G2JNG1 304 aa16.77■□□□□ 0.28
TOP3B-217ENST00000489581 BLACEA4D250 179 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms