RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RASGRP1O95267 797 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PGLSO95336 258 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 AP2A1O95782 977 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PRLP01236 227 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PCCBP05166 539 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ANXA6P08133 673 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 HOXC4P09017 264 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ALPIP09923 528 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 KELP23276 732 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 VIPR1P32241 457 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ADCY8P40145 1251 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 MAGEA3P43357 314 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 RPIAP49247 311 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 HK3P52790 923 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 KIAA1024LP59773 190 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 BASP1P80723 227 aaKnown RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 SEMG2Q02383 582 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ITKQ08881 620 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 TRAF2Q12933 501 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 CBLBQ13191 982 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 MSLNQ13421 630 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ACOX1Q15067 660 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ELOCQ15369 112 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 DEFB133Q30KQ1 61 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PRRT3Q5FWE3 981 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ARMC12Q5T9G4 340 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ENPP7Q6UWV6 458 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 USP45Q70EL2 814 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 CAND1Q86VP6 1230 aaKnown RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 HOOK3Q86VS8 718 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 MARCH9Q86YJ5 346 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PPIL6Q8IXY8 311 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 RBFAQ8N0V3 343 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 NDUFAF2Q8N183 169 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 SDR16C5Q8N3Y7 309 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 FBXO25Q8TCJ0 367 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 NXPE2Q96DL1 559 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 SCRN2Q96FV2 425 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 WDR92Q96MX6 357 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PWWP2AQ96N64 755 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 WDR83Q9BRX9 315 aaKnown RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 TCEAL2Q9H3H9 227 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 KLQ9UEF7 1012 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 SHOC2Q9UQ13 582 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 CLCA2Q9UQC9 943 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 TTLL3Q9Y4R7 772 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 OR1A2Q9Y585 309 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 ARID1BQ8NFD5 2236 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 FRYQ5TBA9 3013 aa10.52□□□□□ -0.72
SCAMP4-208ENST00000489554 PTPRBP23467 1997 aa10.52□□□□□ -0.72
SCAMP4-208ENST00000489554 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 LOC285095A0A1B0GVY8 99 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 A8MX80 341 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 USP12O75317 370 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 CTSEP14091 401 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 TSHRP16473 764 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 CA4P22748 312 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 TRIM23P36406 574 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 WNT3AP56704 352 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 SRP54P61011 504 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 INSM1Q01101 510 aaPredicted RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 TARDBPQ13148 414 aaKnown RBP eCLIP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 MPP3Q13368 585 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 ARHGEF7Q14155 803 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 SPARCL1Q14515 664 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 MORF4L2Q15014 288 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 NR0B2Q15466 257 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 CNGA3Q16281 694 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 ALG11Q2TAA5 492 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 ESRP1Q6NXG1 681 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 EMBQ6PCB8 327 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 LVRNQ6Q4G3 990 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 RANBP10Q6VN20 620 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 HID1Q8IV36 788 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 GSPT2Q8IYD1 628 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 DCBLD1Q8N8Z6 715 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 MCUQ8NE86 351 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 MDM1Q8TC05 714 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 SCG3Q8WXD2 468 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 LRRC45Q96CN5 670 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 NUS1Q96E22 293 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 COQ10AQ96MF6 247 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 MCCC1Q96RQ3 725 aaPredicted RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 BOCQ9BWV1 1114 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 NRSN2Q9GZP1 204 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 WDR26Q9H7D7 661 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 CASS4Q9NQ75 786 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 FAM114A2Q9NRY5 505 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 PNMA8BQ9ULN7 279 aaPredicted RBP10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 DOLKQ9UPQ8 538 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 PPIL1Q9Y3C6 166 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 RAI2Q9Y5P3 530 aa10.52□□□□□ -0.73
SCAMP4-208ENST00000489554 DGKBQ9Y6T7 804 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms