RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 CCDC89Q8N998 374 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 RMI1Q9H9A7 625 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 IL26Q9NPH9 171 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 U3KQA8 63 aa17.21■□□□□ 0.35
MDC1-206ENST00000489540 ARID1BQ8NFD5 2236 aaPredicted RBP17.21■□□□□ 0.35
MDC1-206ENST00000489540 EME2A4GXA9 379 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 STX7O15400 261 aaKnown RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 SLC25A14O95258 325 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 AP2A1O95782 977 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 LPOP22079 712 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 SPAM1P38567 509 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 TCEA2Q15560 299 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 PYCR3Q53H96 274 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 DENND5AQ6IQ26 1287 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 OGFOD3Q6PK18 319 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 C4orf22Q6V702 233 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 LINC00523Q86TU6 105 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 GALNT13Q8IUC8 556 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 RASGEF1CQ8N431 466 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 FAM46DQ8NEK8 389 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 NAT6Q93015 286 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 GLYATL1Q969I3 302 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 OR2M4Q96R27 311 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 C19orf43Q9BQ61 176 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 SUDS3Q9H7L9 328 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 PAK5Q9P286 719 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 GULP1Q9UBP9 304 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 TTC7AQ9ULT0 858 aaPredicted RBP17.21■□□□□ 0.34
MDC1-206ENST00000489540 MSRB2Q9Y3D2 182 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 GPSM3Q9Y4H4 160 aa17.21■□□□□ 0.34
MDC1-206ENST00000489540 CPED1A4D0V7 1026 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 GPR89AB7ZAQ6 455 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 USP12O75317 370 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
MDC1-206ENST00000489540 GPR89BP0CG08 455 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 MYF5P13349 255 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 SPINK2P20155 84 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 ADCY8P40145 1251 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 CCDC173Q0VFZ6 552 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 MSLNQ13421 630 aaPredicted RBP17.2■□□□□ 0.34
MDC1-206ENST00000489540 OLIG2Q13516 323 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 LRP8Q14114 963 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 MARK2Q7KZI7 788 aaKnown RBP17.2■□□□□ 0.34
MDC1-206ENST00000489540 PHYKPLQ8IUZ5 450 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 SLC35F3Q8IY50 421 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 PDCD7Q8N8D1 485 aaKnown RBP17.2■□□□□ 0.34
MDC1-206ENST00000489540 OR6C4Q8NGE1 309 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 CCL4L1Q8NHW4 92 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 VPS35Q96QK1 796 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 DPEP2Q9H4A9 486 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 ZNHIT2Q9UHR6 403 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 KLK13Q9UKR3 277 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 PADI4Q9UM07 663 aa17.2■□□□□ 0.34
MDC1-206ENST00000489540 OAS3Q9Y6K5 1087 aaKnown RBP17.2■□□□□ 0.34
MDC1-206ENST00000489540 DNAJC6O75061 913 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 CTBSQ01459 385 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 CCNI2Q6ZMN8 369 aaPredicted RBP17.19■□□□□ 0.34
MDC1-206ENST00000489540 GSTA5Q7RTV2 222 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 NRROSQ86YC3 692 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 CACTIN-AS1Q8N1I8 211 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 IFI44Q8TCB0 444 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 PTCD2Q8WV60 388 aaKnown RBP17.19■□□□□ 0.34
MDC1-206ENST00000489540 ABCG4Q9H172 646 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 ARL5AQ9Y689 179 aa17.19■□□□□ 0.34
MDC1-206ENST00000489540 TP53BP1Q12888 1972 aaPredicted RBP17.18■□□□□ 0.34
MDC1-206ENST00000489540 GLYATL1P3A0A0U1RQE8 302 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 E7EVH7 732 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 CES2O00748 559 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 BUD23O43709 281 aaKnown RBP17.18■□□□□ 0.34
MDC1-206ENST00000489540 VEGFDO43915 354 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 NUAK1O60285 661 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 JUPP14923 745 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 LMAN1P49257 510 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 ITGA9Q13797 1035 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 ATP13A5Q4VNC0 1218 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 GUSBP11Q6P575 273 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 EFL1Q7Z2Z2 1120 aaKnown RBP17.18■□□□□ 0.34
MDC1-206ENST00000489540 TAB3Q8N5C8 712 aaPredicted RBP17.18■□□□□ 0.34
MDC1-206ENST00000489540 PRELID2Q8N945 189 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 GPR156Q8NFN8 814 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 OR4K2Q8NGD2 314 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 OSBPL9Q96SU4 736 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 RAB6BQ9NRW1 208 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 TAAR2Q9P1P5 351 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 ATXN10Q9UBB4 475 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 APPL1Q9UKG1 709 aa17.18■□□□□ 0.34
MDC1-206ENST00000489540 GRID2O43424 1007 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 OPA1O60313 960 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 SUN1O94901 812 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 GAS8O95995 478 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 ETS1P14921 441 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 ZNF8P17098 575 aaPredicted RBP17.17■□□□□ 0.34
MDC1-206ENST00000489540 RPL22P35268 128 aaKnown RBP17.17■□□□□ 0.34
MDC1-206ENST00000489540 HADHAP40939 763 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
MDC1-206ENST00000489540 CHRNA6Q15825 494 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms