RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 STK38Q15208 465 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 NFIL3Q16649 462 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 HIF1AQ16665 826 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 FAAH2Q6GMR7 532 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 DUS1LQ6P1R4 473 aaKnown RBP11.39□□□□□ -0.59
HDAC6-233ENST00000489352 MEX3BQ6ZN04 569 aaKnown RBP11.39□□□□□ -0.59
HDAC6-233ENST00000489352 FAM92BQ6ZTR7 304 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM200AQ86VY9 491 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CEP57L1Q8IYX8 460 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
HDAC6-233ENST00000489352 NT5C1BQ96P26 610 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 SLX1AQ9BQ83 275 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 HERPUD2Q9BSE4 406 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM51Q9NW97 253 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CPNE7Q9UBL6 633 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 STAP1Q9ULZ2 295 aa11.39□□□□□ -0.59
HDAC6-233ENST00000489352 CCDC88CQ9P219 2028 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 KIR2DS5A0A0G2JLQ3 304 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 A0A0G2JNG1 304 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 LILRA5A6NI73 299 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 OR5K4A6NMS3 321 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 KIR2DS3K7RE56 304 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 EML2O95834 649 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 SERPINA4P29622 427 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 CSNK1G2P78368 415 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 PDCLQ13371 301 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 KIR2DS5Q14953 304 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.38□□□□□ -0.596e-7■□□□□ 9.1
HDAC6-233ENST00000489352 PYCR3Q53H96 274 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 INO80DQ53TQ3 878 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 FAM69BQ5VUD6 431 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 B3GNTL1Q67FW5 361 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 IRGCQ6NXR0 463 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 CHST15Q7LFX5 561 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 PRIMA1Q86XR5 153 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 CAMK1DQ8IU85 385 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 TRIM48Q8IWZ4 208 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 PPP4R1Q8TF05 950 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 KLHL6Q8WZ60 621 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 INTS4Q96HW7 963 aaKnown RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 MAGEB10Q96LZ2 347 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 CXXC4Q9H2H0 198 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 SYNCQ9H7C4 482 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 ATP13A3Q9H7F0 1226 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 ANLNQ9NQW6 1124 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 PPARGC1AQ9UBK2 798 aaKnown RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 ZNF212Q9UDV6 495 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM98Q9Y2Y6 226 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 COQ4Q9Y3A0 265 aa11.38□□□□□ -0.59
HDAC6-233ENST00000489352 A0A0U1RQS6 177 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 KIF1CO43896 1103 aaKnown RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 DAB1O75553 588 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 LETM1O95202 739 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 ASMTLO95671 621 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 KRT5P13647 590 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 ADSLP30566 484 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 GPR1P46091 355 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 MAPKAPK2P49137 400 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 RBPJQ06330 500 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 RALGDSQ12967 914 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 IRAK1BP1Q5VVH5 260 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 AFMIDQ63HM1 303 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 FAM173BQ6P4H8 233 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 C11orf57Q6ZUT1 292 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 DPPA4Q7L190 304 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 PRSS42Q7Z5A4 293 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 PHLDB2Q86SQ0 1253 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 CCDC47Q96A33 483 aaKnown RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 GBP5Q96PP8 586 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 TUBGCP5Q96RT8 1024 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 ZBTB20Q9HC78 741 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDAC6-233ENST00000489352 TBC1D29Q9UFV1 150 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 PADI2Q9Y2J8 665 aa11.37□□□□□ -0.59
HDAC6-233ENST00000489352 DOCK10Q96BY6 2186 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 I6L893 689 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 MASP2O00187 686 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 CETN3O15182 167 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 VIPP01282 170 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 F3P13726 295 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 FOLR1P15328 257 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 CA7P43166 264 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 FOLH1Q04609 750 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 GPS2Q13227 327 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 DSG2Q14126 1118 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 KCNAB1Q14722 419 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 PRKD1Q15139 912 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 TLR1Q15399 786 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 MEA1Q16626 185 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 TMEM198Q66K66 360 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 GRAMD1CQ8IYS0 662 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 CPLX3Q8WVH0 158 aa11.36□□□□□ -0.59
HDAC6-233ENST00000489352 SCARF2Q96GP6 870 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-233ENST00000489352 ZNF514Q96K75 400 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms