RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MPP3Q13368 585 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 TAZQ16635 292 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 TBC1D25Q3MII6 688 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 PHF19Q5T6S3 580 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 ZDHHC20Q5W0Z9 365 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 PDPK2PQ6A1A2 396 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 RAD9BQ6WBX8 426 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 ARHGEF18Q6ZSZ5 1173 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 RFLNAQ6ZTI6 216 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CHST15Q7LFX5 561 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 PELI3Q8N2H9 469 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 TTC13Q8NBP0 860 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 ZNF248Q8NDW4 579 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCDC112Q8NEF3 446 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCL4L1Q8NHW4 92 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 BLOC1S5Q8TDH9 187 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 GPBAR1Q8TDU6 330 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 CCDC97Q96F63 343 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 SLC38A3Q99624 504 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 DESI2Q9BSY9 194 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 ZCCHC2Q9C0B9 1178 aaKnown RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 OR2AG1Q9H205 316 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 LRRN3Q9H3W5 708 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 OSGEPL1Q9H4B0 414 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 TRABDQ9H4I3 376 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 RMI1Q9H9A7 625 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 VPS18Q9P253 973 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 SATB2Q9UPW6 733 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 EFR3BQ9Y2G0 817 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 AAR2Q9Y312 384 aaKnown RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 PCDHA3Q9Y5H8 950 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 RNF215Q9Y6U7 377 aa9.06□□□□□ -0.96
HDAC6-232ENST00000489053 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-232ENST00000489053 C2orf81A6NN90 581 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GPR89AB7ZAQ6 455 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 TAF4O00268 1085 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PLD2O14939 933 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PJA2O43164 708 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GRID2O43424 1007 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 KRT86O43790 486 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ECEL1O95672 775 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 FGF1P05230 155 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GPR89BP0CG08 455 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 RBP3P10745 1247 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ACP5P13686 325 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PNLIPP16233 465 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 RBL1P28749 1068 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 MAZP56270 477 aaKnown RBP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 DCDC1P59894 354 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ERVPABLB-1P60509 514 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 OTUD4Q01804 1114 aaKnown RBP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 WASHC5Q12768 1159 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 NOMO1Q15155 1222 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 INSCQ1MX18 579 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PYCR3Q53H96 274 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 SEL1L2Q5TEA6 688 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 NYAP1Q6ZVC0 841 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 SPRED1Q7Z699 444 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PIM3Q86V86 326 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GAS2L3Q86XJ1 694 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 TRIM48Q8IWZ4 208 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ZNF567Q8N184 647 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 CBARPQ8N350 705 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 FBXO39Q8N4B4 442 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 TRAM1L1Q8N609 369 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GPR156Q8NFN8 814 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 OR10G6Q8NH81 332 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ACTL9Q8TC94 416 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 SH3KBP1Q96B97 665 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 NAF1Q96HR8 494 aaKnown RBP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 ALS2CR12Q96Q35 445 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 FCRL5Q96RD9 977 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 TRIB3Q96RU7 358 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 AGAP2Q99490 1192 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 CMKLR1Q99788 373 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 FOXP3Q9BZS1 431 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 GBA3Q9H227 469 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 CARD9Q9H257 536 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 SPATS2LQ9NUQ6 558 aaKnown RBP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 KCNK4Q9NYG8 393 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC6-232ENST00000489053 APPL1Q9UKG1 709 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 PRKAB1Q9Y478 270 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 DUSP10Q9Y6W6 482 aa9.05□□□□□ -0.96
HDAC6-232ENST00000489053 DOCK9Q9BZ29 2069 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 LAMA5O15230 3695 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 GRID2IPA4D2P6 1211 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 RCCD1A6NED2 376 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 PDZK1P1A8MUH7 402 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 AGRPO00253 132 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 STX7O15400 261 aaKnown RBP9.04□□□□□ -0.96
HDAC6-232ENST00000489053 DUX1O43812 170 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 NOBOXO60393 691 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 PPFIA2O75334 1257 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 TNFSF15O95150 251 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 CPNE6O95741 557 aa9.04□□□□□ -0.96
HDAC6-232ENST00000489053 FTCDO95954 541 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms