RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 HID1Q8IV36 788 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 NOA1Q8NC60 698 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 SNF8Q96H20 258 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 COX14Q96I36 57 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 HIC2Q96JB3 615 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF778Q96MU6 729 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 TRIM56Q9BRZ2 755 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 LRRC61Q9BV99 259 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 FRMD8Q9BZ67 464 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 CDH19Q9H159 772 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 ERVMER34-1Q9H9K5 563 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 TM7SF3Q9NS93 570 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 DNAAF2Q9NVR5 837 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 NLE1Q9NVX2 485 aaPredicted RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 APOBEC3BQ9UH17 382 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 MOSPD1Q9UJG1 213 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 TMPRSS11EQ9UL52 423 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 CNOT6Q9ULM6 557 aaKnown RBP10.97□□□□□ -0.65
UBE4B-210ENST00000488228 TMEM98Q9Y2Y6 226 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 SNX24Q9Y343 169 aa10.97□□□□□ -0.65
UBE4B-210ENST00000488228 SPTBN2O15020 2390 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PRSS38A1L453 326 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 FAM187AA6NFU0 413 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 OR51F1A6NGY5 319 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 ESPNB1AK53 854 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 TOR1BO14657 336 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A9O60656 530 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PPFIA2O75334 1257 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PYGLP06737 847 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 JUNDP17535 347 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A6P19224 532 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A1P22309 533 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A4P22310 534 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 KELP23276 732 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 MC4RP32245 332 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A3P35503 534 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A5P35504 534 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 ITGA8P53708 1063 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 SRP54P61011 504 aaKnown RBP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 XIAPP98170 497 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PDE1BQ01064 536 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PEX6Q13608 980 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 TSTD2Q5T7W7 516 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 ZDHHC20Q5W0Z9 365 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 CES3Q6UWW8 571 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 HOOK3Q86VS8 718 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 NLRP8Q86W28 1048 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PHYKPLQ8IUZ5 450 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 AGGF1Q8N302 714 aaeCLIP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 OXR1Q8N573 874 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 LRRN4CLQ8ND94 238 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 MCUQ8NE86 351 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 ZNF548Q8NEK5 533 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 OR56A4Q8NGH8 313 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 OR13J1Q8NGT2 312 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 NETO1Q8TDF5 533 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 GLYATL1Q969I3 302 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PWWP2AQ96N64 755 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 IL22Q9GZX6 179 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 FAM96AQ9H5X1 160 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A7Q9HAW7 530 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A10Q9HAW8 530 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UGT1A8Q9HAW9 530 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 CYP4F12Q9HCS2 524 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 UCKL1Q9NWZ5 548 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 BFARQ9NZS9 450 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 BTBD3Q9Y2F9 522 aa10.96□□□□□ -0.65
UBE4B-210ENST00000488228 PCYT1BQ9Y5K3 369 aaPredicted RBP10.96□□□□□ -0.65
UBE4B-210ENST00000488228 ESYT3A0FGR9 886 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CCDC162PA2VCL2 907 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CTAGE15A4D2H0 777 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 H3BM21 787 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 TP73O15350 636 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 FFAR2O15552 330 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF500O60304 480 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PIAS2O75928 621 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SRP72O76094 671 aaKnown RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SLC25A14O95258 325 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 RASGRP1O95267 797 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ASMTLO95671 621 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CSF2P04141 144 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CEACAM5P06731 702 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 HOXC4P09017 264 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CTAGE8P0CG41 777 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ITGALP20701 1170 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ADRA1DP25100 572 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 NMBRP28336 390 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 HADHAP40939 763 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 MAGEA3P43357 314 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 GNPDA1P46926 289 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 HK3P52790 923 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SARNPP82979 210 aaKnown RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SLC7A5Q01650 507 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PPARDQ03181 441 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 BNIP3Q12983 259 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 NFATC2Q13469 925 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms