RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SLITRK4Q8IW52 837 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 RHOT1Q8IXI2 618 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 SPATA22Q8NHS9 363 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 CCHCR1Q8TD31 782 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 USP7Q93009 1102 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 CCDC97Q96F63 343 aaPredicted RBP11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 COX14Q96I36 57 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 TRIM5Q9C035 493 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 ZMYND15Q9H091 742 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 UBP1Q9NZI7 540 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 PKD2L2Q9NZM6 624 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 CNOT6Q9ULM6 557 aaKnown RBP11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 KCNK6Q9Y257 313 aa11.22□□□□□ -0.61
NIPAL3-207ENST00000488155 PRAMEF33A0A0G2JMD5 474 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PPP1R12AO14974 1030 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 CST8O60676 142 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 SNX2O60749 519 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PMPCBO75439 489 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 MTA2O94776 668 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PYGLP06737 847 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 CCL4P13236 92 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 ACP5P13686 325 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PECAM1P16284 738 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 CD1CP29017 333 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 UCNP55089 124 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 RPL26P61254 145 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 TBX2Q13207 712 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 HENMT1Q5T8I9 393 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 PCSK4Q6UW60 755 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 CCDC81Q6ZN84 652 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 NLRP8Q86W28 1048 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 ZFAND4Q86XD8 727 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 EID2BQ96D98 161 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 IMP4Q96G21 291 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 SCARF2Q96GP6 870 aaPredicted RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 LYSMD1Q96S90 227 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 CMKLR1Q99788 373 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 SPATA16Q9BXB7 569 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 ADGRE3Q9BY15 652 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 ZFYVE1Q9HBF4 777 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 DDX56Q9NY93 547 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 TMEM9Q9P0T7 183 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 DNPEPQ9ULA0 475 aa11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 RPL26L1Q9UNX3 145 aaKnown RBP11.21□□□□□ -0.61
NIPAL3-207ENST00000488155 SEC16AO15027 2179 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 DNAJC6O75061 913 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 C1QL1O75973 258 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 PTPN3P26045 913 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 MLLT3P42568 568 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC1A1P43005 524 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 MARCKSL1P49006 195 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 CFHR1Q03591 330 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 CDK18Q07002 472 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ADCY2Q08462 1091 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 LY6DQ14210 128 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 NOMO1Q15155 1222 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 PLA2G4EQ3MJ16 856 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SNAP47Q5SQN1 464 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 LRRC38Q5VT99 294 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SPOCD1Q6ZMY3 1216 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF438Q7Z4V0 828 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ZC3H18Q86VM9 953 aaKnown RBP11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 TC2NQ8N9U0 490 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 GPR26Q8NDV2 337 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC37A2Q8TED4 501 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 JPH3Q8WXH2 748 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 CCDC74BQ96LY2 380 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 TRIB3Q96RU7 358 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC38A3Q99624 504 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 GPR63Q9BZJ6 419 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC25A51Q9H1U9 297 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 OR2AG1Q9H205 316 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 GLOD4Q9HC38 313 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 BPIFA1Q9NP55 256 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 KCNK4Q9NYG8 393 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 FOXJ2Q9P0K8 574 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ATXN10Q9UBB4 475 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF711Q9Y462 761 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 PCDHGA7Q9Y5G6 932 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 ALG6Q9Y672 507 aa11.2□□□□□ -0.62
NIPAL3-207ENST00000488155 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 IGHV1OR21-1A0A087WYE8 117 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 A0A0A6YYK5 440 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 IGHV5-10-1A0A0J9YXX1 117 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 A8MU76 341 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF487B1APH4 448 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 C9orf172C9J069 976 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 AURKAO14965 403 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 EFSO43281 561 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 GRID2O43424 1007 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 MTX2O75431 263 aa11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 SLC25A14O95258 325 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-207ENST00000488155 ZNF8P17098 575 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms