RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 RAB15P59190 212 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 NIPAL4Q0D2K0 466 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 KLHL30Q0D2K2 578 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 ATP1A1-AS1Q5TC04 95 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 CPNE8Q86YQ8 564 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 ARRDC2Q8TBH0 407 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 TEKT4Q8WW24 435 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 TBC1D10AQ9BXI6 508 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 GPN2Q9H9Y4 310 aaPredicted RBP16.04■□□□□ 0.16
SRRT-212ENST00000487311 MRPL47Q9HD33 250 aaKnown RBP16.04■□□□□ 0.16
SRRT-212ENST00000487311 SARS2Q9NP81 518 aaKnown RBP16.04■□□□□ 0.16
SRRT-212ENST00000487311 FBXO8Q9NRD0 319 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 KLHL3Q9UH77 587 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 TUBD1Q9UJT1 453 aa16.04■□□□□ 0.16
SRRT-212ENST00000487311 MFSD11O43934 449 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 STK17BO94768 372 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 MYBL1P10243 752 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 MAP4P27816 1152 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 GARSP41250 739 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 ARSEP51690 589 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 EPHB1P54762 984 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 LRP8Q14114 963 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 UBAP2LQ14157 1087 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 PIGHQ14442 188 aaPredicted RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 ZNF648Q5T619 568 aaPredicted RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 ALG1LQ6GMV1 187 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 NDUFAF2Q8N183 169 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 FAM71BQ8TC56 605 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 MAML1Q92585 1016 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 EID2BQ96D98 161 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 ABHD17AQ96GS6 310 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 CATSPER2Q96P56 530 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 POLR1EQ9GZS1 481 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 THAP2Q9H0W7 228 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 ARFGAP3Q9NP61 516 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 PRDM8Q9NQV8 689 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 RBM22Q9NW64 420 aaKnown RBP eCLIP16.03■□□□□ 0.16
SRRT-212ENST00000487311 ANKMY1Q9P2S6 941 aa16.03■□□□□ 0.16
SRRT-212ENST00000487311 TMEM184BQ9Y519 407 aaPredicted RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 MRPS18BQ9Y676 258 aaKnown RBP16.03■□□□□ 0.16
SRRT-212ENST00000487311 K7EM74 188 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 MATN3O15232 486 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 CAPN5O15484 640 aaPredicted RBP16.02■□□□□ 0.16
SRRT-212ENST00000487311 SNX2O60749 519 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 ACP5P13686 325 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 SERPINB6P35237 376 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 CASRP41180 1078 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 MAPK9P45984 424 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 SPINT3P49223 89 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 FOXK1P85037 733 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 GALNT2Q10471 571 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 CDC20Q12834 499 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 HENMT1Q5T8I9 393 aaKnown RBP16.02■□□□□ 0.16
SRRT-212ENST00000487311 NCBP2-AS2Q69YL0 99 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 CEACAM20Q6UY09 585 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 LRRC49Q8IUZ0 686 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 TDRD1Q9BXT4 1180 aaKnown RBP16.02■□□□□ 0.16
SRRT-212ENST00000487311 DTLQ9NZJ0 730 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 OGFRQ9NZT2 677 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 SCHIP1Q9P0W5 487 aaPredicted RBP16.02■□□□□ 0.16
SRRT-212ENST00000487311 VPS18Q9P253 973 aa16.02■□□□□ 0.16
SRRT-212ENST00000487311 PTPN13Q12923 2485 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 DLGAP3O95886 979 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 PYGLP06737 847 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 ZNF28P17035 718 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 TYRO3Q06418 890 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 ABHD18Q0P651 414 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 SLC10A2Q12908 348 aaPredicted RBP16.01■□□□□ 0.15
SRRT-212ENST00000487311 KRT81Q14533 505 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 PAFAH1B3Q15102 231 aaKnown RBP16.01■□□□□ 0.15
SRRT-212ENST00000487311 HGSNATQ68CP4 663 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 C16orf46Q6P387 395 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 LYSMD3Q7Z3D4 306 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 SLC9B2Q86UD5 537 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 NIPA2Q8N8Q9 360 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 LPCAT1Q8NF37 534 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 C9orf43Q8TAL5 461 aaPredicted RBP16.01■□□□□ 0.15
SRRT-212ENST00000487311 TRIM11Q96F44 468 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 LYSMD1Q96S90 227 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 PCDH9Q9HC56 1237 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 ATXN10Q9UBB4 475 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 CPNE7Q9UBL6 633 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 TTLL3Q9Y4R7 772 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 SLC30A1Q9Y6M5 507 aa16.01■□□□□ 0.15
SRRT-212ENST00000487311 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
SRRT-212ENST00000487311 CLEC18AA5D8T8 446 aa16■□□□□ 0.15
SRRT-212ENST00000487311 POLR1CO15160 346 aaPredicted RBP16■□□□□ 0.15
SRRT-212ENST00000487311 NUAK1O60285 661 aa16■□□□□ 0.15
SRRT-212ENST00000487311 HLA-DQB2P05538 268 aa16■□□□□ 0.15
SRRT-212ENST00000487311 MMP2P08253 660 aa16■□□□□ 0.15
SRRT-212ENST00000487311 FURINP09958 794 aa16■□□□□ 0.15
SRRT-212ENST00000487311 F3P13726 295 aa16■□□□□ 0.15
SRRT-212ENST00000487311 ZNF8P17098 575 aaPredicted RBP16■□□□□ 0.15
SRRT-212ENST00000487311 CCNCP24863 283 aa16■□□□□ 0.15
SRRT-212ENST00000487311 ZNF165P49910 485 aa16■□□□□ 0.15
SRRT-212ENST00000487311 GFERP55789 205 aa16■□□□□ 0.15
SRRT-212ENST00000487311 DPYSL3Q14195 570 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms