RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 ABCD2Q9UBJ2 740 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 DNAJC15Q9Y5T4 150 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 GBF1Q92538 1859 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 AZIN1O14977 448 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 RHOBTB1O94844 696 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 MATN4O95460 622 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 HMGA1P17096 107 aaKnown RBP25.98■■□□□ 1.75
HLA-C-208ENST00000487245 PPP3CCP48454 512 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 MRPL19P49406 292 aaKnown RBP25.98■■□□□ 1.75
HLA-C-208ENST00000487245 ATP6V0D1P61421 351 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 RALGDSQ12967 914 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 OR4D1Q15615 310 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 COQ5Q5HYK3 327 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 ZNF783Q6ZMS7 281 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 GOLM1Q8NBJ4 401 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 OSBPL11Q9BXB4 747 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 TDRD1Q9BXT4 1180 aaKnown RBP25.98■■□□□ 1.75
HLA-C-208ENST00000487245 DERL2Q9GZP9 239 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 ARMC1Q9NVT9 282 aa25.98■■□□□ 1.75
HLA-C-208ENST00000487245 VPS4BO75351 444 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 NDUFS3O75489 264 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 PGM3O95394 542 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 CXCL10P02778 98 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 CHRM1P11229 460 aaPredicted RBP25.97■■□□□ 1.75
HLA-C-208ENST00000487245 RGRP47804 291 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 IKBKEQ14164 716 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 TPGS2Q68CL5 300 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 KIAA1841Q6NSI8 718 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 HERC6Q8IVU3 1022 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 OR4K2Q8NGD2 314 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 STAG3L4Q8TBR4 150 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 KIAA1191Q96A73 305 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 ADGRE3Q9BY15 652 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 SPO11Q9Y5K1 396 aa25.97■■□□□ 1.75
HLA-C-208ENST00000487245 STAMBPO95630 424 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 KLKB1P03952 638 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 LPOP22079 712 aaPredicted RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 BORAQ6PGQ7 559 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 DHFR2Q86XF0 187 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 RNF168Q8IYW5 571 aaPredicted RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 ALDH16A1Q8IZ83 802 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 RYBPQ8N488 228 aaPredicted RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 MINDY1Q8N5J2 469 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 ANKFN1Q8N957 763 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 OR9I1Q8NGQ6 314 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 TWIST2Q8WVJ9 160 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 LRTOMTQ8WZ04 291 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 COQ10BQ9H8M1 238 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 FBRSL1Q9HCM7 1045 aaKnown RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 PCDHGB4Q9UN71 923 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 PCDHGB5Q9Y5G0 923 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 ACTL7AQ9Y615 435 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 KERAO60938 352 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 PYGLP06737 847 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 RPL17P18621 184 aaKnown RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 SLC7A2P52569 658 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 RAD51Q06609 339 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 TAF12Q16514 161 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 AP1ARQ63HQ0 302 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 TSPEARQ8WU66 669 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 TRMT2BQ96GJ1 504 aaKnown RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 KLF16Q9BXK1 252 aaPredicted RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 RBM38Q9H0Z9 239 aaKnown RBP25.96■■□□□ 1.75
HLA-C-208ENST00000487245 MID1IP1Q9NPA3 183 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 PTTG2Q9NZH5 202 aa25.96■■□□□ 1.75
HLA-C-208ENST00000487245 A0A0J9YYE9 177 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 UBA6A0AVT1 1052 aaPredicted RBP25.95■■□□□ 1.74
HLA-C-208ENST00000487245 LCHNA4D1U4 455 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 ABLIM3O94929 683 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 PRLP01236 227 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 F11P03951 625 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 PSMC3P17980 439 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 TSPAN8P19075 237 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 CD9P21926 228 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 RNF219Q5W0B1 726 aaPredicted RBP25.95■■□□□ 1.74
HLA-C-208ENST00000487245 RETREG3Q86VR2 466 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 MIER2Q8N344 545 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 NKAPQ8N5F7 415 aaKnown RBP25.95■■□□□ 1.74
HLA-C-208ENST00000487245 OR2T34Q8NGX1 318 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 OR2T3Q8NH03 318 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 ZNF461Q8TAF7 563 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 IGSF21Q96ID5 467 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 CNOT6Q9ULM6 557 aaKnown RBP25.95■■□□□ 1.74
HLA-C-208ENST00000487245 RAI2Q9Y5P3 530 aa25.95■■□□□ 1.74
HLA-C-208ENST00000487245 C7orf72A4D263 438 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 AQP12BA6NM10 295 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 UBXN8O00124 270 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 CBX4O00257 560 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 VILLO15195 856 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 SEC24AO95486 1093 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 LATS1O95835 1130 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 BMP2P12643 396 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 HSD17B1P14061 328 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 CDH13P55290 713 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 FOXM1Q08050 763 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 SLC5A9Q2M3M2 681 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 AQP12AQ8IXF9 295 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 MDGA1Q8NFP4 955 aa25.94■■□□□ 1.74
HLA-C-208ENST00000487245 GKN1Q9NS71 199 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms