RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PRAMEF1O95521 474 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 ENGP17813 658 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 MC4RP32245 332 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 RXRGP48443 463 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 ARSDP51689 593 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 ARL4CP56559 192 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 GUCY2DQ02846 1103 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 SF3A2Q15428 464 aaKnown RBP19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 TRADDQ15628 312 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 HIF1AQ16665 826 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 GPR33Q49SQ1 333 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 PRR23CQ6ZRP0 262 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 SNX20Q7Z614 316 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 TMEM135Q86UB9 458 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 HINFPQ9BQA5 517 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 NAT9Q9BTE0 207 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 FOXP3Q9BZS1 431 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 PHACTR1Q9C0D0 580 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 ASB8Q9H765 288 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 EPB41L5Q9HCM4 733 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 SAMD15Q9P1V8 674 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 SLC2A6Q9UGQ3 507 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 TMPRSS11EQ9UL52 423 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 SLC30A1Q9Y6M5 507 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 OTOGLQ3ZCN5 2332 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 TP53BP1Q12888 1972 aaPredicted RBP19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 ADAMTS9Q9P2N4 1935 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 LNP1A1A4G5 178 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 EIF3HO15372 352 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 GFRA3O60609 400 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 SLC25A14O95258 325 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 NMBRP28336 390 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 PLTPP55058 493 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 TUBB4BP68371 445 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 EIF2B5Q13144 721 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 NFATC2Q13469 925 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 MSS51Q4VC12 460 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 CASC4Q6P4E1 433 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 ENPP7Q6UWV6 458 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 ZDHHC24Q6UX98 284 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 PARGQ86W56 976 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 CCNJLQ8IV13 435 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 HDAC10Q969S8 669 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 MFSD3Q96ES6 412 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 STAMBPL1Q96FJ0 436 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 ELF4Q99607 663 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 EBNA1BP2Q99848 306 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 SUDS3Q9H7L9 328 aaPredicted RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 TRIM39Q9HCM9 518 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 FSCN3Q9NQT6 498 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 SLC17A4Q9Y2C5 497 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 FNDC3AQ9Y2H6 1198 aaKnown RBP19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 TEX264Q9Y6I9 313 aa19.22■□□□□ 0.67
PCOLCE-208ENST00000487172 TRBV5-4A0A0C4DH59 114 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CCDC78A2IDD5 438 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CCDC162PA2VCL2 907 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 TMEM202A6NGA9 273 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CCL22O00626 93 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 INPP4BO15327 924 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A9O60656 530 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 USP1O94782 785 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CER1O95813 267 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CSF2P04141 144 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 DMDP11532 3685 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A6P19224 532 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 ITGALP20701 1170 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A1P22309 533 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A4P22310 534 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A3P35503 534 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A5P35504 534 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 CACNG1Q06432 222 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 HLA-BQ31612 363 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 BBS9Q3SYG4 887 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 ANKRD20A4Q4UJ75 823 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 AFTPHQ6ULP2 937 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 PHYKPLQ8IUZ5 450 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 LRRN4CLQ8ND94 238 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 OR56A4Q8NGH8 313 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 FBXO25Q8TCJ0 367 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 ULK4Q96C45 1275 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 SCARF2Q96GP6 870 aaPredicted RBP19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 PWWP2AQ96N64 755 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A7Q9HAW7 530 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A10Q9HAW8 530 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 UGT1A8Q9HAW9 530 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 VPS18Q9P253 973 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 MAD1L1Q9Y6D9 718 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 RPS6KL1Q9Y6S9 549 aa19.21■□□□□ 0.67
PCOLCE-208ENST00000487172 TMEM131Q92545 1883 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 PLXNB3Q9ULL4 1909 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 A0A1B0GTQ1 180 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 ESYT3A0FGR9 886 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 GPR89AB7ZAQ6 455 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 SLU7O95391 586 aaKnown RBP19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 TTC4O95801 387 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 CEACAM5P06731 702 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 GPR89BP0CG08 455 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 PAMP19021 973 aa19.2■□□□□ 0.66
PCOLCE-208ENST00000487172 FOXN2P32314 431 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms