RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TMEM253P0C7T8 217 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 CSTF2P33240 577 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMC4-216ENST00000485645 FASLGP48023 281 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 SPINT3P49223 89 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 PPM1FP49593 454 aaPredicted RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 PPIDQ08752 370 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 QPCTQ16769 361 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 HENMT1Q5T8I9 393 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 CHST15Q7LFX5 561 aaPredicted RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 VASH2Q86V25 355 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 SFRP1Q8N474 314 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 AGBL5Q8NDL9 886 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 OR8K1Q8NGG5 319 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 SLC37A2Q8TED4 501 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 AHCYL2Q96HN2 611 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 WDR24Q96S15 920 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 SLC38A3Q99624 504 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 ADGRE3Q9BY15 652 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 ZMYND15Q9H091 742 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 FAM83DQ9H4H8 585 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 PRKAB1Q9Y478 270 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 OAS3Q9Y6K5 1087 aaKnown RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 SSU72P8A0A1W2PR75 194 aa17■□□□□ 0.31
SMC4-216ENST00000485645 LRRD1A4D1F6 860 aa17■□□□□ 0.31
SMC4-216ENST00000485645 RGSL1A5PLK6 1076 aa17■□□□□ 0.31
SMC4-216ENST00000485645 STMND1H3BQB6 276 aa17■□□□□ 0.31
SMC4-216ENST00000485645 J3QKU1 62 aa17■□□□□ 0.31
SMC4-216ENST00000485645 MMP2P08253 660 aa17■□□□□ 0.31
SMC4-216ENST00000485645 THRAP10827 490 aa17■□□□□ 0.31
SMC4-216ENST00000485645 FGF3P11487 239 aaPredicted RBP17■□□□□ 0.31
SMC4-216ENST00000485645 MPSTP25325 297 aa17■□□□□ 0.31
SMC4-216ENST00000485645 IFI35P80217 286 aaPredicted RBP17■□□□□ 0.31
SMC4-216ENST00000485645 ZBTB17Q13105 803 aa17■□□□□ 0.31
SMC4-216ENST00000485645 TRIM14Q14142 442 aa17■□□□□ 0.31
SMC4-216ENST00000485645 TMEM71Q6P5X7 295 aa17■□□□□ 0.31
SMC4-216ENST00000485645 PLD5Q8N7P1 536 aa17■□□□□ 0.31
SMC4-216ENST00000485645 OR10G6Q8NH81 332 aa17■□□□□ 0.31
SMC4-216ENST00000485645 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
SMC4-216ENST00000485645 TRAF3IP1Q8TDR0 691 aaPredicted RBP17■□□□□ 0.31
SMC4-216ENST00000485645 DNAJC7Q99615 494 aa17■□□□□ 0.31
SMC4-216ENST00000485645 ARHGAP9Q9BRR9 750 aa17■□□□□ 0.31
SMC4-216ENST00000485645 MAK16Q9BXY0 300 aaKnown RBP17■□□□□ 0.31
SMC4-216ENST00000485645 STN1Q9H668 368 aaKnown RBP17■□□□□ 0.31
SMC4-216ENST00000485645 RMI1Q9H9A7 625 aa17■□□□□ 0.31
SMC4-216ENST00000485645 PCDHGA3Q9Y5H0 932 aa17■□□□□ 0.31
SMC4-216ENST00000485645 HEY1Q9Y5J3 304 aa17■□□□□ 0.31
SMC4-216ENST00000485645 FADS2P1A8MWK0 482 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 ZNF487B1APH4 448 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 AKR1B10O60218 316 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 EML2O95834 649 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 ITGB2P05107 769 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 CSF2RBP32927 897 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 HHEXQ03014 270 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 AP1B1Q10567 949 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.99■□□□□ 0.31
SMC4-216ENST00000485645 XKR5Q6UX68 686 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 ZNF761Q86XN6 746 aaPredicted RBP16.99■□□□□ 0.31
SMC4-216ENST00000485645 CNTD1Q8N815 330 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 EXTL1Q92935 676 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 TMEM9Q9P0T7 183 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 PCDHGA4Q9Y5G9 962 aa16.99■□□□□ 0.31
SMC4-216ENST00000485645 PCYT1BQ9Y5K3 369 aaPredicted RBP16.99■□□□□ 0.31
SMC4-216ENST00000485645 SDK2Q58EX2 2172 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 APOL1O14791 398 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 DUX1O43812 170 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 SLC2A4P14672 509 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 ARHGAP25P42331 645 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 ATP1A2P50993 1020 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 GALNT3Q14435 633 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 PDK1Q15118 436 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 LINC00303Q3SY05 128 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 SLC9A4Q6AI14 798 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 IYDQ6PHW0 289 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 LYSMD3Q7Z3D4 306 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 VSIG1Q86XK7 387 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 EXD3Q8N9H8 876 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 JPH3Q8WXH2 748 aaPredicted RBP16.98■□□□□ 0.31
SMC4-216ENST00000485645 ART4Q93070 314 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 SH3KBP1Q96B97 665 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 CARD9Q9H257 536 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 ZFYVE1Q9HBF4 777 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 SARS2Q9NP81 518 aaKnown RBP16.98■□□□□ 0.31
SMC4-216ENST00000485645 SLC39A1Q9NY26 324 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 TBC1D29Q9UFV1 150 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 KCNK6Q9Y257 313 aa16.98■□□□□ 0.31
SMC4-216ENST00000485645 C3orf70A6NLC5 250 aaPredicted RBP16.97■□□□□ 0.31
SMC4-216ENST00000485645 EFCAB7A8K855 629 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 B4E171 279 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 PPP1R12AO14974 1030 aaPredicted RBP16.97■□□□□ 0.31
SMC4-216ENST00000485645 GRID2O43424 1007 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 NUAK1O60285 661 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 TPM1P09493 284 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 ACP5P13686 325 aa16.97■□□□□ 0.31
SMC4-216ENST00000485645 ZFXP17010 805 aaPredicted RBP16.97■□□□□ 0.31
SMC4-216ENST00000485645 TSPAN7P41732 249 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms