RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 OR4D9Q8NGE8 314 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 ADGRE3Q9BY15 652 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 B3GNT4Q9C0J1 378 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 FAM83DQ9H4H8 585 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 CNOT6Q9ULM6 557 aaKnown RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 PCDHB11Q9Y5F2 797 aa25.5■■□□□ 1.67
HLA-F-227ENST00000485513 OAS3Q9Y6K5 1087 aaKnown RBP25.5■■□□□ 1.67
HLA-F-227ENST00000485513 DNAJC6O75061 913 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 TPM1P09493 284 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 PLA2G2AP14555 144 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 CD82P27701 267 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 ARHGAP25P42331 645 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 FASLGP48023 281 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 SRSF6Q13247 344 aaKnown RBP25.49■■□□□ 1.67
HLA-F-227ENST00000485513 SQSTM1Q13501 440 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 TRA2AQ13595 282 aaKnown RBP eCLIP25.49■■□□□ 1.67
HLA-F-227ENST00000485513 VSIG1Q86XK7 387 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 SLC37A2Q8TED4 501 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 DPYSL5Q9BPU6 564 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 PRKAB1Q9Y478 270 aa25.49■■□□□ 1.67
HLA-F-227ENST00000485513 TRBV23OR9-2A0A075B6M9 112 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 RGSL1A5PLK6 1076 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 C3orf70A6NLC5 250 aaPredicted RBP25.48■■□□□ 1.67
HLA-F-227ENST00000485513 CSF2RBP32927 897 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 GPLD1P80108 840 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 AP1B1Q10567 949 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 MANEAQ5SRI9 462 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 SLC9A4Q6AI14 798 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 CHST15Q7LFX5 561 aaPredicted RBP25.48■■□□□ 1.67
HLA-F-227ENST00000485513 SFRP1Q8N474 314 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 SGF29Q96ES7 293 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 CHP1Q99653 195 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 MAK16Q9BXY0 300 aaKnown RBP25.48■■□□□ 1.67
HLA-F-227ENST00000485513 ABHD10Q9NUJ1 306 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 SPTLC3Q9NUV7 552 aa25.48■■□□□ 1.67
HLA-F-227ENST00000485513 PCYT1BQ9Y5K3 369 aaPredicted RBP25.48■■□□□ 1.67
HLA-F-227ENST00000485513 FADS2P1A8MWK0 482 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 APOL1O14791 398 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 EML2O95834 649 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 GALNT3Q14435 633 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 PDK1Q15118 436 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 VASH2Q86V25 355 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 DTX1Q86Y01 620 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 RHOT2Q8IXI1 618 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 AGBL5Q8NDL9 886 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 MED8Q96G25 268 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 CCDC42Q96M95 316 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 SLC38A3Q99624 504 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 CEP41Q9BYV8 373 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 ZMYND15Q9H091 742 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 RMI1Q9H9A7 625 aa25.47■■□□□ 1.67
HLA-F-227ENST00000485513 MTA2O94776 668 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 KRT1P04264 644 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 THRAP10827 490 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 FGF3P11487 239 aaPredicted RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 ZFXP17010 805 aaPredicted RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 MPSTP25325 297 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 PPM1FP49593 454 aaPredicted RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 LYSMD3Q7Z3D4 306 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 ZNF761Q86XN6 746 aaPredicted RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 VSTM4Q8IW00 320 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 AHCYL2Q96HN2 611 aaKnown RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 TAAR9Q96RI9 348 aa25.46■■□□□ 1.67
HLA-F-227ENST00000485513 NHEJ1Q9H9Q4 299 aaPredicted RBP25.46■■□□□ 1.67
HLA-F-227ENST00000485513 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-227ENST00000485513 PPP1R12AO14974 1030 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-227ENST00000485513 CSTF2P33240 577 aaKnown RBP eCLIP25.45■■□□□ 1.66
HLA-F-227ENST00000485513 ODF2Q5BJF6 829 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 CHCHD2P9Q5T1J5 151 aaPredicted RBP25.45■■□□□ 1.66
HLA-F-227ENST00000485513 FAM182AQ5T1J6 154 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 LRRC38Q5VT99 294 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 TMEM71Q6P5X7 295 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 NPNTQ6UXI9 565 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 KDELC2Q7Z4H8 507 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 NT5DC3Q86UY8 548 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 RFX6Q8HWS3 928 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 CCDC112Q8NEF3 446 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 OR10G6Q8NH81 332 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 IMP4Q96G21 291 aaKnown RBP25.45■■□□□ 1.66
HLA-F-227ENST00000485513 AGAP3Q96P47 875 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 OLFM3Q96PB7 478 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 TRIB3Q96RU7 358 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 ZFYVE1Q9HBF4 777 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 TMEM9Q9P0T7 183 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 TBC1D29Q9UFV1 150 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 KCNK6Q9Y257 313 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 SDK2Q58EX2 2172 aa25.45■■□□□ 1.66
HLA-F-227ENST00000485513 MFAP3LO75121 409 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 ACP5P13686 325 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 HHEXQ03014 270 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 RNF25Q96BH1 459 aaPredicted RBP25.44■■□□□ 1.66
HLA-F-227ENST00000485513 EID2BQ96D98 161 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 SPATA16Q9BXB7 569 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 CARD9Q9H257 536 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 STN1Q9H668 368 aaKnown RBP25.44■■□□□ 1.66
HLA-F-227ENST00000485513 SARS2Q9NP81 518 aaKnown RBP25.44■■□□□ 1.66
HLA-F-227ENST00000485513 PCDHGA3Q9Y5H0 932 aa25.44■■□□□ 1.66
HLA-F-227ENST00000485513 STMND1H3BQB6 276 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 DUX1O43812 170 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms