RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 RMI1Q9H9A7 625 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 WDR6Q9NNW5 1121 aaKnown RBP5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 FBXO34Q9NWN3 711 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 EHD2Q9NZN4 543 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 BARX2Q9UMQ3 279 aaPredicted RBP5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 SMG5Q9UPR3 1016 aaKnown RBP5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 ZNF711Q9Y462 761 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 NR2E1Q9Y466 385 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 NFE2L3Q9Y4A8 694 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 ZFP37Q9Y6Q3 630 aaPredicted RBP5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 PTPRDP23468 1912 aa5.71□□□□□ -1.5
NHLRC3-205ENST00000485407 NOTCH4Q99466 2003 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CDHR4A6H8M9 788 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SMTNL1A8MU46 457 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 A8MXQ7 604 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PTGES3LE9PB15 166 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PEX12O00623 359 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PRRG1O14668 218 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ZNF197O14709 1029 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 GUCY1B2O75343 617 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 RFPL2O75678 378 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 GJB3O75712 270 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 RPP40O75818 363 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CYP7B1O75881 506 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 BEST1O76090 585 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FGF19O95750 216 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CLEC3BP05452 202 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 TPM2P07951 284 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CSH1P0DML2 217 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CSH2P0DML3 217 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 HAPLN1P10915 354 aaPredicted RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PTPN2P17706 415 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FDXRP22570 491 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 LMO2P25791 158 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ETV4P43268 484 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 HARS2P49590 506 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 EPHB3P54753 998 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ARPP19P56211 112 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 BPIFB4P59827 614 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 RPS3AP61247 264 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 RPL10AP62906 217 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SF3A3Q12874 501 aaKnown RBP eCLIP5.7□□□□□ -1.57e-8■■■□□ 14.7
NHLRC3-205ENST00000485407 TOP3AQ13472 1001 aaPredicted RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 DCTN2Q13561 401 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PCOLCEQ15113 449 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 EXOC3L4Q17RC7 722 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 P3H1Q32P28 736 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CBWD6Q4V339 395 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SLC39A12Q504Y0 691 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 TCP11X2Q5H9J9 407 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CBWD3Q5JTY5 395 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CBWD5Q5RIA9 395 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 RARS2Q5T160 578 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 TRIM68Q6AZZ1 485 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ABLIM2Q6H8Q1 611 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 DGAT2L7PQ6IED9 249 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 LARP4Q71RC2 724 aaKnown RBP eCLIP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 MED25Q71SY5 747 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 GALNT4Q8N4A0 578 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ANKRD53Q8N9V6 530 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ATAD1Q8NBU5 361 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 B3GALNT2Q8NCR0 500 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 LMO3Q8TAP4 145 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SLC35B2Q8TB61 432 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 TBC1D15Q8TC07 691 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 BPIFB1Q8TDL5 484 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ATRIPQ8WXE1 791 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SMG7Q92540 1137 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SEMA4DQ92854 862 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PSMG2Q969U7 264 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ZNF707Q96C28 371 aaPredicted RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FAM120BQ96EK7 910 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FEM1CQ96JP0 617 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CNOT6LQ96LI5 555 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ZNF512Q96ME7 567 aaPredicted RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SLC46A1Q96NT5 459 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SYT15Q9BQS2 421 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 MRPL45Q9BRJ2 306 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FUCA2Q9BTY2 467 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SLC46A2Q9BY10 475 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 GPR88Q9GZN0 384 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ELOVL4Q9GZR5 314 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SLC25A18Q9H1K4 315 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 EPC1Q9H2F5 836 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 NDST4Q9H3R1 872 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 ZWILCHQ9H900 591 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 CYP4F11Q9HBI6 524 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 APOBEC3GQ9HC16 384 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 PCDH18Q9HCL0 1135 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 MRPS18AQ9NVS2 196 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 DNMT3BQ9UBC3 853 aaKnown RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 HESX1Q9UBX0 185 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 BAG5Q9UL15 447 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 KIAA1257Q9ULG3 409 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SHOC2Q9UQ13 582 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 USP15Q9Y4E8 981 aaPredicted RBP5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 INSL5Q9Y5Q6 135 aa5.7□□□□□ -1.5
NHLRC3-205ENST00000485407 SNX5Q9Y5X3 404 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms