RNA–Protein interactions for RNA: ENST00000483595.1

PDCD4-207, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-207ENST00000483595 ZNF419Q96HQ0 510 aaPredicted RBP6.61□□□□□ -1.35
PDCD4-207ENST00000483595 FAM46AQ96IP4 442 aaKnown RBP6.61□□□□□ -1.35
PDCD4-207ENST00000483595 ELMO2Q96JJ3 720 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 SCYL1Q96KG9 808 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 UBXN10Q96LJ8 280 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 FEM1AQ9BSK4 669 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 SPON2Q9BUD6 331 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 ZBP1Q9H171 429 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 CCDC68Q9H2F9 335 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 MAGEE1Q9HCI5 957 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
PDCD4-207ENST00000483595 CATSPERZQ9NTU4 200 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 PIH1D1Q9NWS0 290 aaKnown RBP6.61□□□□□ -1.35
PDCD4-207ENST00000483595 NDE1Q9NXR1 346 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 PRKAG2Q9UGJ0 569 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 TAGLN3Q9UI15 199 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 DNAJC16Q9Y2G8 782 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 COL4A6Q14031 1691 aa6.61□□□□□ -1.35
PDCD4-207ENST00000483595 CHD5Q8TDI0 1954 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SHROOM3Q8TF72 1996 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 LTBP2Q14767 1821 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SYCE1LA8MT33 242 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CAPN14A8MX76 684 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ANKRD66B4E2M5 251 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ANKRD65E5RJM6 399 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SPECC1L-ADORA2AF8WAN1 911 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CBX4O00257 560 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SLC9A3R1O14745 358 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TEX28O15482 410 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 GYG2O15488 501 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SMIM24O75264 130 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ZMPSTE24O75844 475 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 GJB5O95377 273 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CXCL14O95715 111 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 PRKCGP05129 697 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RB1P06400 928 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TPBGLP0DKB5 382 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 T-ENOLP0DO92 83 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 DRD2P14416 443 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RPL17P18621 184 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 GABRB3P28472 473 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SERPINB3P29508 390 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 NUMBP49757 651 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ST13P50502 369 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ZNF140P52738 457 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 EPHA5P54756 1037 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TAS2R39P59534 338 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RPS24P62847 133 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 OVGP1Q12889 678 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CDH18Q13634 790 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ITGA9Q13797 1035 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 HERC3Q15034 1050 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CCDC85BQ15834 202 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RNF219Q5W0B1 726 aaPredicted RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CXorf57Q6NSI4 855 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 LRRC8EQ6NSJ5 796 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 METTL2BQ6P1Q9 378 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RFWD3Q6PCD5 774 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TTC23LQ6PF05 361 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 NCEH1Q6PIU2 408 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 EPGNQ6UW88 154 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CMC1Q7Z7K0 106 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 NKAPQ8N5F7 415 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SLC25A41Q8N5S1 370 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 OR13J1Q8NGT2 312 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 FIBINQ8TAL6 211 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 VWCEQ96DN2 955 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 PDLIM5Q96HC4 596 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CDKN2AIPNLQ96HQ2 116 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ZNF778Q96MU6 729 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SAMD11Q96NU1 681 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 GPR78Q96P69 363 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 KLHL5Q96PQ7 755 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TUBGCP5Q96RT8 1024 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 RAD9AQ99638 391 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CCT7Q99832 543 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 OMDQ99983 421 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TBC1D10AQ9BXI6 508 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TDRD1Q9BXT4 1180 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SLC2A11Q9BYW1 496 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 CDH19Q9H159 772 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TFB2MQ9H5Q4 396 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 NOD2Q9HC29 1040 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 MRPL40Q9NQ50 206 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TMEM45AQ9NWC5 275 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TAS2R13Q9NYV9 303 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 KLHL42Q9P2K6 505 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 TBC1D14Q9P2M4 693 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 DNMT3BQ9UBC3 853 aaKnown RBP6.6□□□□□ -1.35
PDCD4-207ENST00000483595 BCAP29Q9UHQ4 241 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 VPS28Q9UK41 221 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 APPL1Q9UKG1 709 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 STK38LQ9Y2H1 464 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 PCDHB1Q9Y5F3 818 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 OR51B4Q9Y5P0 310 aa6.6□□□□□ -1.35
PDCD4-207ENST00000483595 A0A0D9SEW6 157 aa6.59□□□□□ -1.35
PDCD4-207ENST00000483595 MATN2O00339 956 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms