RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ELF3P78545 371 aaPredicted RBP7.77□□□□□ -1.17
SNX13-208ENST00000482558 GAD2Q05329 585 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 NME3Q13232 169 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 CCDC153Q494R4 210 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 TEX44Q53QW1 395 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 RAB6CQ53S08 254 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 OTUD1Q5VV17 481 aaPredicted RBP7.77□□□□□ -1.17
SNX13-208ENST00000482558 TIGD7Q6NT04 549 aaPredicted RBP7.77□□□□□ -1.17
SNX13-208ENST00000482558 CASC4Q6P4E1 433 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 GLB1LQ6UWU2 654 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 CXCL17Q6UXB2 119 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 DENND5BQ6ZUT9 1274 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 FAM47EQ6ZV65 393 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ZNF534Q76KX8 674 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ASRGL1Q7L266 308 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 OTOAQ7RTW8 1153 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 PID1Q7Z2X4 250 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 THAP5Q7Z6K1 395 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ECHDC2Q86YB7 292 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 KLHDC8BQ8IXV7 354 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ARHGAP24Q8N264 748 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 FITM2Q8N6M3 262 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 TRPV1Q8NER1 839 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 C10orf82Q8WW14 230 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 MYLPFQ96A32 169 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 SH3KBP1Q96B97 665 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 APIPQ96GX9 242 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 RADILQ96JH8 1075 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ALPK1Q96QP1 1244 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 IL22Q9GZX6 179 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.77□□□□□ -1.17
SNX13-208ENST00000482558 RAB6CQ9H0N0 254 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 TRPV6Q9H1D0 765 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 GBA3Q9H227 469 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 LRMDAQ9H2I8 198 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 FBXO44Q9H4M3 255 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 PRDM12Q9H4Q4 367 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 KIF9Q9HAQ2 790 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 MLXIPLQ9NP71 852 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 PIGVQ9NUD9 493 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ABCF3Q9NUQ8 709 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 LRFN1Q9P244 771 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 OR12D3Q9UGF7 316 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 LNPEPQ9UIQ6 1025 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 SPO11Q9Y5K1 396 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 DOCK3Q8IZD9 2030 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 TRIP12Q14669 1992 aaPredicted RBP7.77□□□□□ -1.17
SNX13-208ENST00000482558 MYBPHLA2RUH7 354 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 YJEFN3A6XGL0 299 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 E7ENQ6 273 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ETV2O00321 342 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 CLDN5O00501 218 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 SYN3O14994 580 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 HOXC11O43248 304 aaPredicted RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 KDM1AO60341 852 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CCDC22O60826 627 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 AVILO75366 819 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 BEST1O76090 585 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 IGLV3-25P01717 112 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 LMNAP02545 664 aaKnown RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 MPOP05164 745 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FYNP06241 537 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 APOA4P06727 396 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ASGR1P07306 291 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CKMT1AP12532 417 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 MYL4P12829 197 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 EZRP15311 586 aaKnown RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 VAV1P15498 845 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 HOXA5P20719 270 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ACAT1P24752 427 aaKnown RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 PTPN3P26045 913 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CCR1P32246 355 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 GP5P40197 560 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CTSKP43235 329 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 MAGEA11P43364 429 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 HSPA7P48741 367 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ALDH9A1P49189 494 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 MTNR1BP49286 362 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FLT3LGP49771 235 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 HK2P52789 917 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 ARFIP2P53365 341 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 COPAP53621 1224 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CSE1LP55060 971 aaKnown RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 SRSF2Q01130 221 aaKnown RBP7.76□□□□□ -1.17
SNX13-208ENST00000482558 POU4F1Q01851 419 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 NIPAL4Q0D2K0 466 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FOXO1Q12778 655 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CDH17Q12864 832 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CRYMQ14894 314 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 EFTUD2Q15029 972 aaKnown RBP eCLIP7.76□□□□□ -1.173e-6■■□□□ 13.2
SNX13-208ENST00000482558 ARHGEF6Q15052 776 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 PDCD1Q15116 288 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 UGP2Q16851 508 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 TIGD5Q53EQ6 642 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 SYPL2Q5VXT5 272 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 BSPRYQ5W0U4 402 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 BTBD8Q5XKL5 378 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 DENND5AQ6IQ26 1287 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 CGB2Q6NT52 195 aa7.76□□□□□ -1.17
SNX13-208ENST00000482558 FRMD7Q6ZUT3 714 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 361.3 ms