RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 STK32CQ86UX6 486 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SATL1Q86VE3 508 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 CAMK1DQ8IU85 385 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 NKAPQ8N5F7 415 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 DLG3Q92796 817 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 IMP4Q96G21 291 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 NSMCE2Q96MF7 247 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 CIPCQ9C0C6 399 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
CALD1-220ENST00000482470 OR1I1O60431 355 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 FKBP9O95302 570 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 ALBP02768 609 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 IMPDH1P20839 514 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 AGTR2P50052 363 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 RPL38P63173 70 aaKnown RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 KCTD11Q693B1 232 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 FKBP9P1Q75LS8 142 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 SZRD1Q7Z422 152 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 PGAP3Q96FM1 320 aaPredicted RBP9.11□□□□□ -0.95
CALD1-220ENST00000482470 COQ10BQ9H8M1 238 aa9.11□□□□□ -0.95
CALD1-220ENST00000482470 DHRS12A0PJE2 317 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HHLA1C9JL84 531 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 PDLIM1O00151 329 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 SYN3O14994 580 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CLOCKO15516 846 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CLDN11O75508 207 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HALP42357 657 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HSPA7P48741 367 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 MS4A2Q01362 244 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 PTPRRQ15256 657 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 AASDHQ4L235 1098 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 LIN52Q52LA3 116 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 XKR4Q5GH76 650 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CLLU1OSQ5K130 101 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 RTP2Q5QGT7 225 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 EFL1Q7Z2Z2 1120 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 KDM1BQ8NB78 822 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 KLHDC9Q8NEP7 349 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CANT1Q8WVQ1 401 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 RMND5BQ96G75 393 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 TRMOQ9BU70 441 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 DPY30Q9C005 99 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 UNC93B1Q9H1C4 597 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 EIF3LQ9Y262 564 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 SDK1Q7Z5N4 2213 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 RAD51BO15315 384 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 GPR39O43194 453 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 MTHFD1P11586 935 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 CYBAP13498 195 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HSPA13P48723 471 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 DIO3P55073 304 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 SERINC3Q13530 473 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 SLC5A9Q2M3M2 681 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 TMCO2Q7Z6W1 182 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 CACUL1Q86Y37 369 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 FAM47BQ8NA70 645 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 DRAXINQ8NBI3 349 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 SNRNP27Q8WVK2 155 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 MRPL9Q9BYD2 267 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 MFSD1Q9H3U5 465 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 ELOVL6Q9H5J4 265 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 RUBCNLQ9H714 662 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 PARVBQ9HBI1 364 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 POLR3BQ9NW08 1133 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 TMEM161AQ9NX61 479 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 ARL15Q9NXU5 204 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 PNMA8BQ9ULN7 279 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 LRATO95237 230 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 IL1BP01584 269 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 INHAP05111 366 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HOXD8P13378 290 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 MAP4P27816 1152 aaKnown RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 GABRR2P28476 465 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 PRDX6P30041 224 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HTR7P34969 479 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CDKN1CP49918 316 aaPredicted RBP9.1□□□□□ -0.95
CALD1-220ENST00000482470 ADAM17P78536 824 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 TRAF2Q12933 501 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 SEMA3BQ13214 749 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 NEDD8Q15843 81 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 TTLL9Q3SXZ7 439 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 TECRLQ5HYJ1 363 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 THAP11Q96EK4 314 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 HIPK3Q9H422 1215 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 ZDHHC6Q9H6R6 413 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 CSNK1G1Q9HCP0 422 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 OPTCQ9UBM4 332 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 MOSPD1Q9UJG1 213 aa9.1□□□□□ -0.95
CALD1-220ENST00000482470 LIN7AO14910 233 aaPredicted RBP9.09□□□□□ -0.95
CALD1-220ENST00000482470 SLC25A14O95258 325 aaPredicted RBP9.09□□□□□ -0.95
CALD1-220ENST00000482470 S1PR4O95977 384 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 C1QAP02745 245 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 CAPN1P07384 714 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 PAX3P23760 479 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 HERVK_113P63132 956 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 PHEXP78562 749 aa9.09□□□□□ -0.95
CALD1-220ENST00000482470 LCP2Q13094 533 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms