RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 MFAP3LO75121 409 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 SLC1A1P43005 524 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 PPM1FP49593 454 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 LIMK2P53671 638 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 GPLD1P80108 840 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 ZBTB17Q13105 803 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 SQSTM1Q13501 440 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 TGIF1Q15583 401 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 QPCTQ16769 361 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 LRRC38Q5VT99 294 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 SLC9A4Q6AI14 798 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 NPNTQ6UXI9 565 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 CHST15Q7LFX5 561 aaPredicted RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 RFX6Q8HWS3 928 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 ZNF843Q8N446 348 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 TTC9Q92623 222 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 AHCYL2Q96HN2 611 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 SLC38A3Q99624 504 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 NUDT22Q9BRQ3 303 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 STN1Q9H668 368 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 ZFYVE1Q9HBF4 777 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 RAD18Q9NS91 495 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 DDX56Q9NY93 547 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 ZFC3H1O60293 1989 aaKnown RBP13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 PTPRQQ9UMZ3 2332 aa13.34□□□□□ -0.27
CTDSP1-208ENST00000482272 MGAQ8IWI9 3026 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 IGHV1OR21-1A0A087WYE8 117 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 IGHV5-10-1A0A0J9YXX1 117 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 PPP1R12AO14974 1030 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 EFSO43281 561 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 DNAJC6O75061 913 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 MTA2O94776 668 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 ATP1A1P05023 1023 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 SLC2A4P14672 509 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 ETV5P41161 510 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 FASLGP48023 281 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 HENMT1Q5T8I9 393 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 NKAIN2Q5VXU1 208 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 KIAA1614Q5VZ46 1190 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 TMEM71Q6P5X7 295 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 RHOT1Q8IXI2 618 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 ZSCAN1Q8NBB4 408 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 RCBTB1Q8NDN9 531 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 OR4D9Q8NGE8 314 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 OR10G6Q8NH81 332 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 SH3KBP1Q96B97 665 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 RNF25Q96BH1 459 aaPredicted RBP13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 EID2BQ96D98 161 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 CCDC74BQ96LY2 380 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 AGAP3Q96P47 875 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 TAAR9Q96RI9 348 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 TSPY26PQ9H489 355 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 MAGEE1Q9HCI5 957 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 INTUQ9ULD6 942 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 CNOT6Q9ULM6 557 aaKnown RBP13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 TFR2Q9UP52 801 aa13.33□□□□□ -0.28
CTDSP1-208ENST00000482272 ATMQ13315 3056 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 C9orf172C9J069 976 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 KRT1P04264 644 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 TNNT1P13805 278 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 CSTF2P33240 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 CDK18Q07002 472 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 TBX2Q13207 712 aaPredicted RBP13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 LY6DQ14210 128 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 GALNT3Q14435 633 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 LYSMD3Q7Z3D4 306 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 KDELC2Q7Z4H8 507 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 ZFAND4Q86XD8 727 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 CNGA4Q8IV77 575 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SFRP1Q8N474 314 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 AGBL5Q8NDL9 886 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SGF29Q96ES7 293 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 IMP4Q96G21 291 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SRPK1Q96SB4 655 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SPATA16Q9BXB7 569 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 ZMYND15Q9H091 742 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 SLC25A51Q9H1U9 297 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 CARD9Q9H257 536 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 GOLPH3Q9H4A6 298 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 PRKAB1Q9Y478 270 aa13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 OAS3Q9Y6K5 1087 aaKnown RBP13.32□□□□□ -0.28
CTDSP1-208ENST00000482272 OR5K4A6NMS3 321 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 FADS2P1A8MWK0 482 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 AKR1B15C9JRZ8 316 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 GRID2O43424 1007 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 SPOPO43791 374 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 DUX1O43812 170 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 NUAK1O60285 661 aa13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 SLC25A14O95258 325 aaPredicted RBP13.31□□□□□ -0.28
CTDSP1-208ENST00000482272 EML2O95834 649 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms