RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 B4DLN1 442 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 SOCS6O14544 535 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 ATP2A1O14983 1001 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 PLRG1O43660 514 aaKnown RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 TPPPO94811 219 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 HIST1H2ABP04908 130 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 ALPLP05186 524 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 ACAA1P09110 424 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 PORP16435 677 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 GABRB1P18505 474 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 HIST1H2ADP20671 130 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 HOXA13P31271 388 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 HTR6P50406 440 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 MRPL12P52815 198 aaKnown RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 ECT2LQ008S8 904 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 EPS8Q12929 822 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 MAD2L1Q13257 205 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 DHX34Q14147 1143 aaKnown RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 CALCRLQ16602 461 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 SOWAHCQ53LP3 525 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 PLEKHS1Q5SXH7 462 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 LRIF1Q5T3J3 769 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 KIAA0930Q6ICG6 404 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 DUS1LQ6P1R4 473 aaKnown RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 WDR73Q6P4I2 378 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 HIST3H2AQ7L7L0 130 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 NEXN-AS1Q8NBZ9 246 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 OR8K5Q8NH50 307 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 B4GALNT2Q8NHY0 566 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 TMED6Q8WW62 240 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 RND1Q92730 232 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 ORAI1Q96D31 301 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 PHF21BQ96EK2 531 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 PPP1R13BQ96KQ4 1090 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 CAMK1GQ96NX5 476 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 C1QTNF1Q9BXJ1 281 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 KCNN2Q9H2S1 579 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 MMP25Q9NPA2 562 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 SETD4Q9NVD3 440 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 UBA2Q9UBT2 640 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 CFDP1Q9UEE9 299 aaPredicted RBP3.82□□□□□ -1.8
CBX3-207ENST00000481300 OR14J1Q9UGF5 321 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 NENFQ9UMX5 172 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 RABGAP1Q9Y3P9 1069 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 LRP12Q9Y561 859 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 CLIC4Q9Y696 253 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 NFS1Q9Y697 457 aa3.82□□□□□ -1.8
CBX3-207ENST00000481300 ERCC6L2Q5T890 1561 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CDK13Q14004 1512 aaKnown RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 TROQ12816 1431 aaPredicted RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 IGLV5-52A0A0A0MRZ9 124 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 A0A1W2PQ09 198 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 KANSL1LA0AUZ9 987 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CPED1A4D0V7 1026 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 LACTBL1A8MY62 500 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 M0QZ24 198 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 OGG1O15527 345 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 SPINT2O43291 252 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 T-ENOLP0DO92 83 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 IGHV4-30-4P0DP06 118 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 ANXA7P20073 488 aaKnown RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 ITGB8P26012 769 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 PON1P27169 355 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 SSTR2P30874 369 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CCKARP32238 428 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 ACTN2P35609 894 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CLCNKAP51800 687 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 MFAP4P55083 255 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 HNRNPH2P55795 449 aaKnown RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 SEC61BP60468 96 aaKnown RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 CDC16Q13042 620 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 IRF3Q14653 427 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 ZNF805Q5CZA5 627 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 RAB41Q5JT25 222 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 DCST1Q5T197 706 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CFAP58Q5T655 872 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 FAM69BQ5VUD6 431 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 FRG2Q64ET8 278 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 RGMBQ6NW40 437 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 FAM122CQ6P4D5 195 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 SDCCAG8Q86SQ7 713 aaPredicted RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 ADHFE1Q8IWW8 467 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 CLIP4Q8N3C7 705 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 HJURPQ8NCD3 748 aaPredicted RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 MAGEC3Q8TD91 643 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 APBB2Q92870 758 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 NEUROG1Q92886 237 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 RSRC1Q96IZ7 334 aaKnown RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 FEM1CQ96JP0 617 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 C3orf30Q96M34 536 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 OR2A14Q96R47 310 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 ZPBPQ9BS86 351 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 SIL1Q9H173 461 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 PIGMQ9H3S5 423 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 LTB4R2Q9NPC1 389 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 NOX4Q9NPH5 578 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 OCIAD1Q9NX40 245 aa3.81□□□□□ -1.8
CBX3-207ENST00000481300 SUCLA2Q9P2R7 463 aaPredicted RBP3.81□□□□□ -1.8
CBX3-207ENST00000481300 COPG2Q9UBF2 871 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms