RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 NEXN-AS1Q8NBZ9 246 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 DNAAF4Q8WXU2 420 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 RND1Q92730 232 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 ERP27Q96DN0 273 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 SLF1Q9BQI6 1058 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 SEZ6LQ9BYH1 1024 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 PSD3Q9NYI0 1048 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 TINAGQ9UJW2 476 aa8.71□□□□□ -1.02
CUL3-209ENST00000481135 OR2A25A4D2G3 310 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 EIF4E1BA6NMX2 242 aaKnown RBP8.7□□□□□ -1.02
CUL3-209ENST00000481135 A8MV72 311 aaPredicted RBP8.7□□□□□ -1.02
CUL3-209ENST00000481135 ENTPD3O75355 529 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 PGM3O95394 542 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 IGHV4-30-4P0DP06 118 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 SELLP14151 372 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 IFI35P80217 286 aaPredicted RBP8.7□□□□□ -1.02
CUL3-209ENST00000481135 EGR4Q05215 589 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 CDC16Q13042 620 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 BECN1Q14457 450 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 XKR9Q5GH70 373 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 FAM69BQ5VUD6 431 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 WDR73Q6P4I2 378 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 FOXRED2Q8IWF2 684 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 SCYL3Q8IZE3 742 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 HM13Q8TCT9 377 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 SCARB1Q8WTV0 552 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 PRPF31Q8WWY3 499 aaKnown RBP8.7□□□□□ -1.02
CUL3-209ENST00000481135 LRRC59Q96AG4 307 aaKnown RBP8.7□□□□□ -1.02
CUL3-209ENST00000481135 KIFC3Q9BVG8 833 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 LOXL2Q9Y4K0 774 aa8.7□□□□□ -1.02
CUL3-209ENST00000481135 PCSK5Q92824 1860 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 KRT20P35900 424 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 STAT2P52630 851 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 PNLIPRP2P54317 469 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 CALCRLQ16602 461 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 DECR1Q16698 335 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 C9orf47Q6ZRZ4 202 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 CLEC17AQ6ZS10 378 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 BEST3Q8N1M1 668 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 PCDH20Q8N6Y1 951 aaKnown RBP8.69□□□□□ -1.02
CUL3-209ENST00000481135 LSMEM1Q8N8F7 131 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 MCUQ8NE86 351 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 TAAR8Q969N4 342 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 GRAMD2BQ96HH9 432 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 MRPL1Q9BYD6 325 aaKnown RBP8.69□□□□□ -1.02
CUL3-209ENST00000481135 DBNLQ9UJU6 430 aaKnown RBP8.69□□□□□ -1.02
CUL3-209ENST00000481135 ARHGEF40Q8TER5 1519 aa8.69□□□□□ -1.02
CUL3-209ENST00000481135 CKAP5Q14008 2032 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 INO80B-WBP1J3KQ70 363 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 ERAL1O75616 437 aaKnown RBP8.68□□□□□ -1.02
CUL3-209ENST00000481135 LMO1P25800 156 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 PCLAFQ15004 111 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 MYLK3Q32MK0 819 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 RGMBQ6NW40 437 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 ADGRA1Q86SQ6 560 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 CLIP4Q8N3C7 705 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 IQCF1Q8N6M8 205 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 APPL2Q8NEU8 664 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 SLC22A18Q96BI1 424 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 PHF21BQ96EK2 531 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 SEBOXQ9HB31 216 aaPredicted RBP8.68□□□□□ -1.02
CUL3-209ENST00000481135 PCDH9Q9HC56 1237 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 MCM9Q9NXL9 1143 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 CPSF2Q9P2I0 782 aaKnown RBP8.68□□□□□ -1.02
CUL3-209ENST00000481135 NRBP1Q9UHY1 535 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
CUL3-209ENST00000481135 NFS1Q9Y697 457 aa8.68□□□□□ -1.02
CUL3-209ENST00000481135 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 PLOD3O60568 738 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 AVILO75366 819 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
CUL3-209ENST00000481135 OASLQ15646 514 aaKnown RBP8.67□□□□□ -1.02
CUL3-209ENST00000481135 KCNT1Q5JUK3 1230 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 CCNI2Q6ZMN8 369 aaPredicted RBP8.67□□□□□ -1.02
CUL3-209ENST00000481135 KRT74Q7RTS7 529 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 DNAAF5Q86Y56 855 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 SCML4Q8N228 414 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 IL17RCQ8NAC3 791 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 ELP5Q8TE02 316 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 MIB2Q96AX9 1013 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 NOX4Q9NPH5 578 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 SLC35C2Q9NQQ7 365 aa8.67□□□□□ -1.02
CUL3-209ENST00000481135 KAT6BQ8WYB5 2073 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 GLOD5A6NK44 160 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 P4HA2O15460 535 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 RFPL2O75678 378 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 SSTR2P30874 369 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 HOXA11P31270 313 aaPredicted RBP8.66□□□□□ -1.02
CUL3-209ENST00000481135 HSD17B4P51659 736 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 TAS2R38P59533 333 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 DDR1Q08345 913 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 PAPPA-AS1Q5QFB9 102 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 KRT79Q5XKE5 535 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 TMEM198Q66K66 360 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 NAA16Q6N069 864 aaPredicted RBP8.66□□□□□ -1.02
CUL3-209ENST00000481135 GPR180Q86V85 440 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 KBTBD6Q86V97 674 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 CHERPQ8IWX8 916 aaKnown RBP8.66□□□□□ -1.02
CUL3-209ENST00000481135 SERINC2Q96SA4 455 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms