RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 BOD1L1Q8NFC6 3051 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 KCNK1O00180 336 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 RAD1O60671 282 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 JCHAINP01591 159 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 PIRTP0C851 137 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 ACP5P13686 325 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 F8A1P23610 371 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CCNCP24863 283 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CD82P27701 267 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CA5AP35218 305 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 SPINT3P49223 89 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CSRP3P50461 194 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 FANCCQ00597 558 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 FILIP1LQ4L180 1135 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 TDRD12Q587J7 1177 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CCDC122Q5T0U0 273 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 HENMT1Q5T8I9 393 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 ALKBH5Q6P6C2 394 aaKnown RBP13.17□□□□□ -0.3
PTPN7-212ENST00000480836 BBS5Q8N3I7 341 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 GPR26Q8NDV2 337 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 TRIM11Q96F44 468 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 LYSMD1Q96S90 227 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 SLC38A3Q99624 504 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 DDA1Q9BW61 102 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CEP41Q9BYV8 373 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CDH19Q9H159 772 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 CBX8Q9HC52 389 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 PCDH9Q9HC56 1237 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 ATXN10Q9UBB4 475 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 SLC30A1Q9Y6M5 507 aa13.17□□□□□ -0.3
PTPN7-212ENST00000480836 A0A1W2PQJ5 194 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 B4E171 279 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ANKRD66B4E2M5 251 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 K7EM74 188 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 MYO1FO00160 1098 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ARHGAP6O43182 974 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SNX2O60749 519 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 MBD3O95983 291 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 GYPCP04921 128 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SERPING1P05155 500 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ZNF28P17035 718 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ZNF30P17039 623 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ZNF8P17098 575 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SERPINB6P35237 376 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 TSPAN7P41732 249 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 CD86P42081 329 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 MC2RQ01718 297 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 HHEXQ03014 270 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 GALNT3Q14435 633 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 NFKBIBQ15653 356 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 TMEM164Q5U3C3 297 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 KDELC2Q7Z4H8 507 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 FAM129CQ86XR2 697 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 GALNT13Q8IUC8 556 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 CACNA2D3Q8IZS8 1091 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 IL22RA1Q8N6P7 574 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 NSMCE1Q8WV22 266 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 NCSTNQ92542 709 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 PLEKHG4BQ96PX9 1271 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 TRIB3Q96RU7 358 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 NAT10Q9H0A0 1025 aaKnown RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 SLC25A18Q9H1K4 315 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 ZNF624Q9P2J8 865 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 RCOR3Q9P2K3 495 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 KLHL3Q9UH77 587 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
PTPN7-212ENST00000480836 MRPS18BQ9Y676 258 aaKnown RBP13.16□□□□□ -0.3
PTPN7-212ENST00000480836 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 C1orf232A0A0U1RR37 186 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 PRR19A6NJB7 356 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 AURKAO14965 403 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 NUAK1O60285 661 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 PROSCO94903 275 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 SERPINC1P01008 464 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 OAS2P29728 719 aaKnown RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 EPHB1P54762 984 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 GFERP55789 205 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 GPLD1P80108 840 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 BIRC2Q13490 618 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 IFI16Q16666 785 aaKnown RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-212ENST00000480836 XKR5Q6UX68 686 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
PTPN7-212ENST00000480836 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms