RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SLC30A4O14863 429 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SH3BGRLO75368 114 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 ABATP80404 500 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 KLHL26Q53HC5 615 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 WDR59Q6PJI9 974 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 IFNLR1Q8IU57 520 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 RNF148Q8N7C7 305 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 IFT46Q9NQC8 304 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CLDN11O75508 207 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 MSANTD1Q6ZTZ1 278 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FBXO6Q9NRD1 293 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 NRP2O60462 931 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 GNPDA1P46926 289 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SLC7A2P52569 658 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.51□□□□□ -0.891e-7■□□□□ 10.9
VEGFA-212ENST00000480614 FADS2P1A8MWK0 482 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DDX3YO15523 660 aaKnown RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 APODP05090 189 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DCKP27707 260 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 PTPN9P43378 593 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SMIM5Q71RC9 77 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 C12orf56Q8IXR9 622 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.51□□□□□ -0.893e-7■■■■■ 32.5
VEGFA-212ENST00000480614 OR2T12Q8NG77 320 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FAR1Q8WVX9 515 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 RHOBTB2Q9BYZ6 727 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 COPS7AQ9UBW8 275 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CLDN4O14493 209 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 RAB26Q9ULW5 256 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 GLUD1P00367 558 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PPP3R1P63098 170 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 BST1Q10588 318 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SVOPLQ8N434 492 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PCDH20Q8N6Y1 951 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SNIP1Q8TAD8 396 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DNAAF2Q9NVR5 837 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TIMM13Q9Y5L4 95 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 KIR3DL1P43629 444 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CNTD1Q8N815 330 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DCAKDQ8WVC6 231 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FCRL4Q96PJ5 515 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 XPR1Q9UBH6 696 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PSMD11O00231 422 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF155Q12901 538 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 MED22Q15528 200 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CUZD1Q86UP6 607 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DNAJA4Q8WW22 397 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DHX33Q9H6R0 707 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 NUDT4Q9NZJ9 180 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TULP3O75386 442 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SLC22A17Q8WUG5 538 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CPNE2Q96FN4 548 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CORO1BQ9BR76 489 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 VWA7Q9Y334 891 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 UROSP10746 265 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TPSB2P20231 275 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TBX2Q13207 712 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RAPSNQ13702 412 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TPSAB1Q15661 275 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 UNC5BQ8IZJ1 945 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PCDHGB1Q9Y5G3 927 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 H0Y858 1186 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ASLP04424 464 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TUBA3CQ13748 450 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 VSTM1Q6UX27 236 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ART4Q93070 314 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FERD3LQ96RJ6 166 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 COMMD4Q9H0A8 199 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RNF208Q9H0X6 261 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PIH1D1Q9NWS0 290 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 MIA3Q5JRA6 1907 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 H3BM21 787 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ORC5O43913 435 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SNX3O60493 162 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 SNAPC5O75971 98 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CYP4F2P78329 520 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 GTF2BQ00403 316 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FOLH1Q04609 750 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CYP4F3Q08477 520 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CCNYL2Q5T2Q4 361 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CNSTQ6PJW8 725 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 USP50Q70EL3 339 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 METTL21AQ8WXB1 218 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ELOVL2Q9NXB9 296 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 POLR3HQ9Y535 204 aaPredicted RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 FAM240BA0A1B0GVZ2 78 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 RGS10O43665 173 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 IGFBP5P24593 272 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 EIF2S3P41091 472 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 CACNG1Q06432 222 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 AVL9Q8NBF6 648 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 PNPT1Q8TCS8 783 aaKnown RBP9.5□□□□□ -0.89
VEGFA-212ENST00000480614 TNFAIP8L1Q8WVP5 186 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 IGFLR1Q9H665 355 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 DNAJC11Q9NVH1 559 aa9.5□□□□□ -0.89
VEGFA-212ENST00000480614 ADAMTS13Q76LX8 1427 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms