RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NUP205Q92621 2012 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 UNC80Q8N2C7 3258 aa6.24□□□□□ -1.41
SF3B1-209ENST00000479532 MUC22E2RYF6 1773 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TCRBV21S2A2A0A5A6 115 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CFAP69A5D8W1 941 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF503-AS2A6NEH8 195 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ENO4A6NNW6 628 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TTC34A8MYJ7 566 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 H3BS24 57 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 J3KR12 359 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SGK1O00141 431 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PGRMC1O00264 195 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 MATN3O15232 486 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ALOX15BO15296 676 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 MAFKO60675 156 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ZMPSTE24O75844 475 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TMCC1O94876 653 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 APBB3O95704 486 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 GSRP00390 522 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 FGGP02679 453 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 DNTTP04053 509 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ATP1A1P05023 1023 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CEACAM5P06731 702 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 IFNGR1P15260 489 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PRLRP16471 622 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CA4P22748 312 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 GLDCP23378 1020 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PRKCHP24723 683 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 AVPR2P30518 371 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CXCR5P32302 372 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 MMP13P45452 471 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 STK19P49842 368 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 EIF3EP60228 445 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 GABREP78334 506 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 OTUD4Q01804 1114 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PPIDQ08752 370 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ITKQ08881 620 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 MTAPQ13126 283 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ENPP2Q13822 863 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 BYSLQ13895 437 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 HNRNPDQ14103 355 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ELAVL3Q14576 367 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 NOMO1Q15155 1222 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CRY1Q16526 586 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 HNRNPA1L2Q32P51 320 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TBC1D25Q3MII6 688 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SLC45A4Q5BKX6 768 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CMPK2Q5EBM0 449 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TRIM61Q5EBN2 209 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CARD16Q5EG05 197 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CFAP58Q5T655 872 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 DCAF12L1Q5VU92 463 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 FAM46CQ5VWP2 391 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF776Q68DI1 518 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 NPNTQ6UXI9 565 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 LINGO4Q6UY18 593 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 USP53Q70EK8 1073 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SLC13A5Q86YT5 568 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 C1orf210Q8IVY1 113 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SFTPA1Q8IWL2 248 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SPACA3Q8IXA5 215 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 GBP7Q8N8V2 638 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 OR2AP1Q8NGE2 309 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 OR2T3Q8NH03 318 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 CFAP61Q8NHU2 1237 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PRCCQ92733 491 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 FATE1Q969F0 183 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PPP1R16AQ96I34 528 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 HSPA12BQ96MM6 686 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 GDAP1L1Q96MZ0 367 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 AGAP3Q96P47 875 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PPP1R2P1Q96PQ5 205 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 VAT1Q99536 393 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TLR10Q9BXR5 811 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PARD6BQ9BYG5 372 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 POLR1EQ9GZS1 481 aaKnown RBP6.23□□□□□ -1.41
SF3B1-209ENST00000479532 KLC2Q9H0B6 622 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TMEM245Q9H330 911 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 PDFQ9HBH1 243 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SEPT10Q9P0V9 454 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 RNF14Q9UBS8 474 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 IL36AQ9UHA7 158 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 SCML1Q9UN30 329 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 NCKAP1Q9Y2A7 1128 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 MFHAS1Q9Y4C4 1052 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TTLL3Q9Y4R7 772 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 TECTAO75443 2155 aa6.23□□□□□ -1.41
SF3B1-209ENST00000479532 ATG2BQ96BY7 2078 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 KMT2EQ8IZD2 1858 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 CKAP5Q14008 2032 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 A0A1W2PQ67 120 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6CA6NDK9 693 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6BA6NDN3 693 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 K7ERQ8 282 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 AURKAO14965 403 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 EIF3HO15372 352 aaKnown RBP eCLIP6.22□□□□□ -1.414e-7■■■□□ 14.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms