RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 THPOP40225 353 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 CDKN2DP55273 166 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TAF1CQ15572 869 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 AGAP9Q5VTM2 703 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TAF2Q6P1X5 1199 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 USP51Q70EK9 711 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 IGFN1Q86VF2 1251 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF354CQ86Y25 554 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 OR52K2Q8NGK3 314 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 UBXN10Q96LJ8 280 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TMEM74Q96NL1 305 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 IL12RB2Q99665 862 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TUBB1Q9H4B7 451 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 NANOGQ9H9S0 305 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 WDR37Q9Y2I8 494 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TCRBV5S2A0A599 114 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 UNCXA6NJT0 531 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 M0QZ92 97 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TBX18O95935 607 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 IMPDH1P20839 514 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 CDH3P22223 829 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 CCNCP24863 283 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SHMT2P34897 504 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 GRIK1P39086 918 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 HLCSP50747 726 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 DIO3P55073 304 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 KCNC4Q03721 635 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 XAF1Q6GPH4 301 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ITIH5Q86UX2 942 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 PHYKPLQ8IUZ5 450 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SCN4BQ8IWT1 228 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 MINDY1Q8N5J2 469 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 C2orf69Q8N8R5 385 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 PTERQ96BW5 349 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TSGA13Q96PP4 275 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 FCRL5Q96RD9 977 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 HOPXQ9BPY8 73 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ACBD6Q9BR61 282 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 LHPPQ9H008 270 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 CD320Q9NPF0 282 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 ERGIC3Q9Y282 383 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 BTRCQ9Y297 605 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 TRIM17Q9Y577 477 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 KCTD3Q9Y597 815 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 PCDHA9Q9Y5H5 950 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 HS3ST4Q9Y661 456 aa13.26□□□□□ -0.29
PDZRN3-208ENST00000479530 MKI67P46013 3256 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 OR51F1A6NGY5 319 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 MATN3O15232 486 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 IDUAP35475 653 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 GSK3BP49841 420 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ADARB1P78563 741 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 BFSP2Q13515 415 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 PTPRCAPQ14761 206 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 POLD3Q15054 466 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 DDR2Q16832 855 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 GEN1Q17RS7 908 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 OVOS1Q6IE37 1185 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 TMEM214Q6NUQ4 689 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ISCA2Q86U28 154 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 UPF1Q92900 1129 aaKnown RBP eCLIP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 RIC8BQ9NVN3 520 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 EVLQ9UI08 416 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 AAR2Q9Y312 384 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 NDUFAF1Q9Y375 327 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 DGKBQ9Y6T7 804 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ASPDHA6ND91 283 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 TNFRSF10BO14763 440 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 AXIN1O15169 862 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 SYNCRIPO60506 623 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 CNTN5O94779 1100 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 CDK14O94921 469 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 CPNE6O95741 557 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 LINC00032P0C843 101 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ODC1P11926 461 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 IDO1P14902 403 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ZNF24P17028 368 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 TTKP33981 857 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 POLD2P49005 469 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 KPNA2P52292 529 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 ECT2LQ008S8 904 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 PIGFQ07326 219 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 RGS21Q2M5E4 152 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 HECTD2Q5U5R9 776 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 MANEALQ5VSG8 457 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 RANBP10Q6VN20 620 aa13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 PIWIL3Q7Z3Z3 882 aaKnown RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 RYBPQ8N488 228 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-208ENST00000479530 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms