RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ABCG8Q9H221 673 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 ZNF768Q9H5H4 540 aaKnown RBP15.94■□□□□ 0.14
DDX56-210ENST00000479440 NOD2Q9HC29 1040 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 IGSF5Q9NSI5 407 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 TBC1D29Q9UFV1 150 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 ZNHIT2Q9UHR6 403 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 DNPEPQ9ULA0 475 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 MAP4K5Q9Y4K4 846 aa15.94■□□□□ 0.14
DDX56-210ENST00000479440 NOTCH2Q04721 2471 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 ZNF106Q9H2Y7 1883 aaKnown RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 TTC24A2A3L6 582 aaPredicted RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 PIPSLA2A3N6 862 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 A6NCN8 305 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 C21orf140B9A014 251 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 TOX3O15405 576 aaPredicted RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 C9P02748 559 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 RNF224P0DH78 156 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 F3P13726 295 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 GFERP55789 205 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 CAMK4Q16566 473 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 CA9Q16790 459 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 ERMARDQ5T6L9 678 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 MAMDC2Q7Z304 686 aaPredicted RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 NLRP8Q86W28 1048 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 PHYKPLQ8IUZ5 450 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 NSMCE1Q8WV22 266 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 KCTD15Q96SI1 283 aaPredicted RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 SNRNP25Q9BV90 132 aaKnown RBP15.93■□□□□ 0.14
DDX56-210ENST00000479440 RMI1Q9H9A7 625 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 NLRC4Q9NPP4 1024 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 CPNE7Q9UBL6 633 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 LNPEPQ9UIQ6 1025 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 KCNK6Q9Y257 313 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 PPIL1Q9Y3C6 166 aa15.93■□□□□ 0.14
DDX56-210ENST00000479440 ICE1Q9Y2F5 2266 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 GOLGA6L3A6NEY3 463 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 SNX2O60749 519 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 DNAJC6O75061 913 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 LRCH4O75427 683 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 DNAJB5O75953 348 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 SORBS2O94875 1100 aaKnown RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 ACP5P13686 325 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 CTPS1P17812 591 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 TNFAIP3P21580 790 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 PSMA2P25787 234 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 EEF1GP26641 437 aaKnown RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 TCP11X2Q5H9J9 407 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 PPP6R3Q5H9R7 873 aaPredicted RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 ZNF787Q6DD87 383 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 THAP4Q8WY91 577 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 SCAMP4Q969E2 229 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 SLC25A23Q9BV35 468 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 BRD8Q9H0E9 1235 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 UCK1Q9HA47 277 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 CASS4Q9NQ75 786 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 FAM207AQ9NSI2 230 aaPredicted RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 PRKAB1Q9Y478 270 aa15.92■□□□□ 0.14
DDX56-210ENST00000479440 PCDHGA9Q9Y5G4 932 aaKnown RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 SPTBN1Q01082 2364 aaKnown RBP15.92■□□□□ 0.14
DDX56-210ENST00000479440 RASSF9O75901 435 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 TPM2P07951 284 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 VARSP26640 1264 aaKnown RBP15.91■□□□□ 0.14
DDX56-210ENST00000479440 OGDHQ02218 1023 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 RFLNAQ6ZTI6 216 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 PPP1R3BQ86XI6 285 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 PSTKQ8IV42 348 aaKnown RBP15.91■□□□□ 0.14
DDX56-210ENST00000479440 RAVER1Q8IY67 606 aaKnown RBP15.91■□□□□ 0.14
DDX56-210ENST00000479440 PGBD5Q8N414 524 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 ATPAF2Q8N5M1 289 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 CT55Q8WUE5 264 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 RNF31Q96EP0 1072 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 TGM7Q96PF1 710 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 ACTL8Q9H568 366 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 ZWILCHQ9H900 591 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 LHX9Q9NQ69 397 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 TAB2Q9NYJ8 693 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 PADI1Q9ULC6 663 aa15.91■□□□□ 0.14
DDX56-210ENST00000479440 SPAG6O75602 509 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 UBXN7O94888 489 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 FGF5P12034 268 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 AMD1P17707 334 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 DCTP40126 519 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 MMP13P45452 471 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 KLK7P49862 253 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 SEPHS1P49903 392 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 STC1P52823 247 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 EPHB1P54762 984 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 MAXP61244 160 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 UBE2IP63279 158 aaKnown RBP15.9■□□□□ 0.14
DDX56-210ENST00000479440 SH3BP2P78314 561 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 DPYSQ14117 519 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 PTPRRQ15256 657 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.9■□□□□ 0.14
DDX56-210ENST00000479440 NADK2Q4G0N4 442 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 PRSS42Q7Z5A4 293 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 TRIM48Q8IWZ4 208 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 PIH1D2Q8WWB5 315 aa15.9■□□□□ 0.14
DDX56-210ENST00000479440 ELMO2Q96JJ3 720 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms