RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 NSUN6Q8TEA1 469 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 DPF3Q92784 378 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 CCDC17Q96LX7 622 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 NTPCRQ9BSD7 190 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 NAT9Q9BTE0 207 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 ZSCAN5AQ9BUG6 496 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 SNRNP25Q9BV90 132 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 PRRG3Q9BZD7 231 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 TRMT13Q9NUP7 481 aaKnown RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 C14orf119Q9NWQ9 140 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.15■□□□□ 0.98
SDF4-206ENST00000478938 AASSQ9UDR5 926 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 GIMAP2Q9UG22 337 aa21.15■□□□□ 0.98
SDF4-206ENST00000478938 MAGEB16A2A368 324 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 METTL15A6NJ78 407 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 EFCAB9A8MZ26 197 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 SPATA31C2B4DYI2 1134 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 YES1P07947 543 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 GPX3P22352 226 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 PSMB4P28070 264 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 DEFA1P59665 94 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 DEFA3P59666 94 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 PRKCEQ02156 737 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 SNTA1Q13424 505 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 USP10Q14694 798 aaKnown RBP21.14■□□□□ 0.98
SDF4-206ENST00000478938 FUT11Q495W5 492 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 TOR2AQ5JU69 321 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 ZNF484Q5JVG2 852 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 PRMT9Q6P2P2 845 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 CLYBLQ8N0X4 340 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 KIAA1958Q8N8K9 716 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 GLB1L3Q8NCI6 653 aaPredicted RBP21.14■□□□□ 0.98
SDF4-206ENST00000478938 ZNF555Q8NEP9 628 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 PSKH2Q96QS6 385 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 LGMNQ99538 433 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 NIF3L1Q9GZT8 377 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 ALG2Q9H553 416 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 IARS2Q9NSE4 1012 aaKnown RBP21.14■□□□□ 0.98
SDF4-206ENST00000478938 DTLQ9NZJ0 730 aa21.14■□□□□ 0.98
SDF4-206ENST00000478938 ANGPT2O15123 496 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 ATF4P18848 351 aaPredicted RBP21.14■□□□□ 0.97
SDF4-206ENST00000478938 MLLT3P42568 568 aaPredicted RBP21.14■□□□□ 0.97
SDF4-206ENST00000478938 MASP1P48740 699 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 NDST1P52848 882 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 EPS8Q12929 822 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 KCNAB2Q13303 367 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 GALNT3Q14435 633 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 CLCA4Q14CN2 919 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 CLEC6AQ6EIG7 209 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 CES5AQ6NT32 575 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 VN1R5Q7Z5H4 357 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 ABI1Q8IZP0 508 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 MINDY1Q8N5J2 469 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 OR52K1Q8NGK4 314 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 BPIFB1Q8TDL5 484 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 MCRS1Q96EZ8 462 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 GMCL1Q96IK5 515 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 PHOX2BQ99453 314 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 C1QTNF7Q9BXJ2 289 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 MMP27Q9H306 513 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 EHMT1Q9H9B1 1298 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 GABBR1Q9UBS5 961 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 HCN4Q9Y3Q4 1203 aa21.14■□□□□ 0.97
SDF4-206ENST00000478938 A0A0A0MRY4 1105 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 H0Y626 953 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 OGTO15294 1046 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 NPHS1O60500 1241 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 HUS1O60921 280 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 FADS2O95864 444 aaKnown RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 MYCP01106 439 aaPredicted RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 DNAJB1P25685 340 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 NRARPQ7Z6K4 114 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 HORMAD1Q86X24 394 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 SLC41A1Q8IVJ1 513 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 C4orf19Q8IY42 314 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 HTR3CQ8WXA8 447 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 LRRC58Q96CX6 371 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 AURKBQ96GD4 344 aaPredicted RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 SPATA13Q96N96 652 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 AS3MTQ9HBK9 375 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 TIGARQ9NQ88 270 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 EVLQ9UI08 416 aaPredicted RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 PCDHGA10Q9Y5H3 936 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ZNF780AO75290 641 aaPredicted RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 BBOX1O75936 387 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ICAM2P13598 275 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 CYP3A5P20815 502 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 SLAMF1Q13291 335 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 KRR1Q13601 381 aaKnown RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 WDR49Q8IV35 697 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 HEXIM2Q96MH2 286 aaKnown RBP21.13■□□□□ 0.97
SDF4-206ENST00000478938 RIPOR3Q96MK2 946 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 RHNO1Q9BSD3 238 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ROGDIQ9GZN7 287 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ZFP14Q9HCL3 533 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 ENTPD7Q9NQZ7 604 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 EHD3Q9NZN3 535 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 NARFQ9UHQ1 456 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 PCDHGB6Q9Y5F9 930 aa21.13■□□□□ 0.97
SDF4-206ENST00000478938 PCDHA9Q9Y5H5 950 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms