RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 CLGNO14967 610 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 ATP2A1O14983 1001 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 PTP4A3O75365 173 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 DAB1O75553 588 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 ITGB6P18564 788 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 CCKBRP32239 447 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TMPOP42166 694 aaKnown RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TAS2R40P59535 323 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 MRPS34P82930 218 aaKnown RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 PDE1BQ01064 536 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 ACSM2AQ08AH3 577 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 MAD2L1Q13257 205 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 PNLIPRP3Q17RR3 467 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SOWAHCQ53LP3 525 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 ACSM2BQ68CK6 577 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 GET4Q7L5D6 327 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TEX11Q8IYF3 940 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 HACE1Q8IYU2 909 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 BEST3Q8N1M1 668 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TTC39CQ8N584 583 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 WDTC1Q8N5D0 677 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 KCNH5Q8NCM2 988 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SMRP1Q8NCR6 262 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 FIG4Q92562 907 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 APBB2Q92870 758 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 FAM84BQ96KN1 310 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 MTERF1Q99551 399 aaKnown RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 CMKLR1Q99788 373 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TREX2Q9BQ50 279 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 CENPOQ9BU64 300 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SPRY4Q9C004 299 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SIL1Q9H173 461 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 ALDH8A1Q9H2A2 487 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 DDX31Q9H8H2 851 aaKnown RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SEBOXQ9HB31 216 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TBC1D22BQ9NU19 505 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 UBA2Q9UBT2 640 aaPredicted RBP3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 AMDHD2Q9Y303 409 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 SESN1Q9Y6P5 492 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 TAF1P21675 1872 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 A0A0G2JPF8 293 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 FSD2A1L4K1 749 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 FRMD3A2A2Y4 597 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 A8MZ25 164 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 HNRNPCL2B2RXH8 293 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 HNRNPCL3B7ZW38 293 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 PTGES3LE9PB15 166 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 HS3ST1O14792 307 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SLC16A5O15375 505 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 HNRNPCL4P0DMR1 293 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 TM4SF1P30408 202 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 CLNS1AP54105 237 aaKnown RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 CDH8P55286 799 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 TAS2R38P59533 333 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 NUCB1Q02818 461 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 EEF1A2Q05639 463 aaKnown RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 COASYQ13057 564 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 PDE1CQ14123 709 aaPredicted RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 DECR1Q16698 335 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 LRIF1Q5T3J3 769 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 JADE1Q6IE81 842 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 UNQ6126/PRO20091Q6UXV3 157 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.88□□□□□ -1.792e-10■□□□□ 10.7
SMARCA1-204ENST00000478420 ANKRD23Q86SG2 305 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 GPR180Q86V85 440 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SFR1Q86XK3 245 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 OR8H2Q8N162 312 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SRBD1Q8N5C6 995 aaKnown RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SPATA22Q8NHS9 363 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 TAAR8Q969N4 342 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 BARD1Q99728 777 aaKnown RBP3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SMARCAD1Q9H4L7 1026 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 SYNCQ9H7C4 482 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 WWOXQ9NZC7 414 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 COPG2Q9UBF2 871 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 STK39Q9UEW8 545 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 FBXW11Q9UKB1 542 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 KCNS2Q9ULS6 477 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 CLIC4Q9Y696 253 aa3.88□□□□□ -1.79
SMARCA1-204ENST00000478420 A0A1W2PRQ8 180 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 KANSL1LA0AUZ9 987 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 SMTNL1A8MU46 457 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 H3BQ06 376 aaPredicted RBP3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 HS6ST1O60243 411 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 DOK2O60496 412 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 GPC4O75487 556 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 HIST1H2ABP04908 130 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 SNRNP70P08621 437 aaKnown RBP3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 CLTBP09497 229 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 ACTN1P12814 892 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 HOXB6P17509 224 aaKnown RBP3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 HIST1H2ADP20671 130 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 S1PR1P21453 382 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 MCM3P25205 808 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 GNL1P36915 607 aaPredicted RBP3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 UBA7P41226 1012 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 GAS1P54826 345 aa3.87□□□□□ -1.79
SMARCA1-204ENST00000478420 DRG2P55039 364 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms