RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 USP46P62068 366 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 IL5RAQ01344 420 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PPP1R8Q12972 351 aaKnown RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ABRQ12979 859 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PKDCCQ504Y2 493 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TXNDC8Q6A555 127 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 REP15Q6BDI9 236 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MSANTD2Q6P1R3 559 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TSPAN14Q8NG11 270 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 PTCD2Q8WV60 388 aaKnown RBP10.98□□□□□ -0.65
COL27A1-204ENST00000477421 RTP4Q96DX8 246 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TRAPPC9Q96Q05 1148 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 KIFC1Q9BW19 673 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 KCNK13Q9HB14 408 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TMEM161AQ9NX61 479 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 NUMA1Q14980 2115 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 LAMB2P55268 1798 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 TMEM247A6NEH6 219 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 SLC38A8A6NNN8 435 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MGEA5O60502 916 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MAFKO60675 156 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 GABBR2O75899 941 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MLYCDO95822 493 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 CAPN1P07384 714 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MSH3P20585 1137 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ITPKAP23677 461 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 DGKAP23743 735 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 GKP32189 559 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 CCT8P50990 548 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 SLC5A9Q2M3M2 681 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 EPGNQ6UW88 154 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 P3H2Q8IVL5 708 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MICU2Q8IYU8 434 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 GPR156Q8NFN8 814 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 MCOLN3Q8TDD5 553 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 CPQQ9Y646 472 aa10.98□□□□□ -0.65
COL27A1-204ENST00000477421 ATP6V0D1P61421 351 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 DAB2P98082 770 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ACOX1Q15067 660 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 IL23RQ5VWK5 629 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 DOK6Q6PKX4 331 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 RNF19BQ6ZMZ0 732 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ZDHHC13Q8IUH4 622 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ACTRT2Q8TDY3 377 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ACAT2Q9BWD1 397 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 BBS2Q9BXC9 721 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 DGCR6LQ9BY27 220 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 IPPKQ9H8X2 491 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 COMMD8Q9NX08 183 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 A0A1B0GVM2 712 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 TCAF2A6NFQ2 919 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 NBNO60934 754 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ANXA5P08758 320 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 DHRS4L1P0CG22 281 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 NIPAL4Q0D2K0 466 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 LCP2Q13094 533 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 TRIM25Q14258 630 aaKnown RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF534Q76KX8 674 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ANKRD46Q86W74 232 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 RASAL3Q86YV0 1011 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 TRAPPC5Q8IUR0 188 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 STK40Q8N2I9 435 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 SPPL2AQ8TCT8 520 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ELMO1Q92556 727 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 PMM1Q92871 262 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 FUBP3Q96I24 572 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 MRGPRX2Q96LB1 330 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 NSUN5Q96P11 429 aaKnown RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 CCDC28BQ9BUN5 200 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 AKTIPQ9H8T0 292 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 LEF1Q9UJU2 399 aaPredicted RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 F5P12259 2224 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 C16orf96A6NNT2 1141 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 GJB5O95377 273 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 EOMESO95936 686 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 MTHFD1P11586 935 aaKnown RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 CCNFP41002 786 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 GDF5P43026 501 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ALDH9A1P49189 494 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 SLC11A1P49279 550 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 PIK3R6Q5UE93 754 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 NECAB2Q7Z6G3 386 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ADAMTSL2Q86TH1 951 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 OFCC1Q8IZS5 231 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 CBR4Q8N4T8 237 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 ZNF276Q8N554 614 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 PYCR2Q96C36 320 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 COPS8Q99627 209 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 POLR3BQ9NW08 1133 aaPredicted RBP10.97□□□□□ -0.65
COL27A1-204ENST00000477421 IRAK4Q9NWZ3 460 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 BLOC1S6Q9UL45 172 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 SLC45A1Q9Y2W3 748 aa10.97□□□□□ -0.65
COL27A1-204ENST00000477421 MYOCOSA0A1B0GUC4 107 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 PDLIM1O00151 329 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 RGS14O43566 566 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 MTX2O75431 263 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 OR56A5P0C7T3 313 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms