RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PNPLA8Q9NP80 782 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ITM2CQ9NQX7 267 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 POLE4Q9NR33 117 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ECHDC1Q9NTX5 307 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 DNAJC11Q9NVH1 559 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SPATA6Q9NWH7 488 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 THUMPD1Q9NXG2 353 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 OR6C2Q9NZP2 312 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 COPG2Q9UBF2 871 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MTRRQ9UBK8 725 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SRRDQ9UH36 339 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 NARFQ9UHQ1 456 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SERPINB13Q9UIV8 391 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 RIMS3Q9UJD0 308 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PLCL2Q9UPR0 1127 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 NAALADL1Q9UQQ1 740 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 POMPQ9Y244 141 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GRIP1Q9Y3R0 1128 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MFHAS1Q9Y4C4 1052 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 TNPO3Q9Y5L0 923 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 AP1M2Q9Y6Q5 423 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PMF1-BGLAPU3KQ54 211 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 DCCP43146 1447 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 NCAPD2Q15021 1401 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 POC1B-GALNT4F8VUJ3 575 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 NEMP1O14524 444 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ABCD4O14678 606 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PPM1DO15297 605 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SGCEO43556 437 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FBXO24O75426 580 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 UPK1BO75841 260 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TGM6O95932 706 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TBX18O95935 607 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 IL1BP01584 269 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 IFNA4P05014 189 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LCKP06239 509 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CD63P08962 238 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SMIM6P0DI80 62 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MYCLP12524 364 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ANXA8P13928 327 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GNSP15586 552 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CKMT2P17540 419 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TNNI1P19237 187 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RAB4AP20338 218 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KCNA5P22460 613 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 IGFBP4P22692 258 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PTAFRP25105 342 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FMO4P31512 558 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ATP5C1P36542 298 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 CPOXP36551 454 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GRIA1P42261 906 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RAP1GAPP47736 663 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ATXN1P54253 815 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ARL4CP56559 192 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 OR2B6P58173 313 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ACTR2P61160 394 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ABCE1P61221 599 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 GRIK2Q13002 908 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MAPK7Q13164 816 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SLC13A2Q13183 592 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 EFR3AQ14156 821 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FLOT2Q14254 428 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SSX2Q16385 188 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 EIF2S3LQ2VIR3 472 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 SLC10A6Q3KNW5 377 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FAM47AQ5JRC9 791 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CCNYL2Q5T2Q4 361 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 HECTD3Q5T447 861 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ANXA8L1Q5VT79 327 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RNF219Q5W0B1 726 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 LIN54Q6MZP7 749 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ERICH5Q6P6B1 374 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF530Q6P9A1 599 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 BHLHB9Q6PI77 547 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TTC33Q6PID6 262 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 TFAP2EQ6VUC0 442 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZYG11AQ6WRX3 759 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LIPIQ6XZB0 460 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 C16orf62Q7Z3J2 963 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SNX20Q7Z614 316 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RETREG3Q86VR2 466 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SNX29P2Q8IUI4 249 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 LYSMD2Q8IV50 215 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CTAGE3PQ8IX95 158 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ETFBKMTQ8IXQ9 262 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SEPT12Q8IYM1 358 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 UBQLNLQ8IYU4 475 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MPP5Q8N3R9 675 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CCDC24Q8N4L8 307 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 OXR1Q8N573 874 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MEIOBQ8N635 442 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 HIPK4Q8NE63 616 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 OR13F1Q8NGS4 319 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ADAM32Q8TC27 787 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PNPT1Q8TCS8 783 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ZFP90Q8TF47 636 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 COPS5Q92905 334 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ART4Q93070 314 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF566Q969W8 418 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms