RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MARCH2Q9P0N8 246 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PSMD13Q9UNM6 376 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 VWA7Q9Y334 891 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RGPD3A6NKT7 1758 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RGPD4Q7Z3J3 1758 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DLEC1Q9Y238 1755 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PHIPQ8WWQ0 1821 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 A0A0G2JN53 185 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 A8MV72 311 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TSC22D2O75157 780 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ADAMTS4O75173 837 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RSL1D1O76021 490 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FADS2O95864 444 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OPN1SWP03999 348 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 MYCLP1P12525 358 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 MZF1P28698 734 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RPL5P46777 297 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 GHRHRQ02643 423 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TAF10Q12962 218 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DNASE1L3Q13609 305 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TP53BP2Q13625 1128 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CDH18Q13634 790 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SYT16Q17RD7 645 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CCDC153Q494R4 210 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ANKRD34AQ69YU3 496 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PAQR3Q6TCH7 311 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ATG14Q6ZNE5 492 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TDRPQ86YL5 185 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 MFN1Q8IWA4 741 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TAGAPQ8N103 731 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DTX3Q8N9I9 347 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 C3orf58Q8NDZ4 430 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SPPL2AQ8TCT8 520 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OTUB1Q96FW1 271 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SORT1Q99523 831 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OLFM1Q99784 485 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SMOQ99835 787 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NIFKQ9BYG3 293 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 IL22Q9GZX6 179 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SMURF2Q9HAU4 748 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FAM105AQ9NUU6 356 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM161AQ9NX61 479 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FZD10Q9ULW2 581 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FCF1Q9Y324 198 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NME7Q9Y5B8 376 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OTOFQ9HC10 1997 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TRANK1O15050 2925 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 BCLAF3A2AJT9 711 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PRORSD1PA6NEY8 169 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FAM159BA6NKW6 160 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TRPC5OSA6NMA1 111 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 M0R129 80 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SNAP91O60641 907 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TRMUO75648 421 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 LTA4HP09960 611 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OCM2P0CE71 109 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OCMP0CE72 109 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 COL6A1P12109 1028 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DDX5P17844 614 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HLA-DPA1P20036 260 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PTGER1P34995 402 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 GRIA2P42262 883 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ALDH9A1P49189 494 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NUDT6P53370 316 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 UFM1P61960 85 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 STARD3Q14849 445 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HSF5Q4G112 596 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 Q7L0L9 218 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SLC26A9Q7LBE3 791 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PIWIL4Q7Z3Z4 852 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RNF175Q8N4F7 328 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DHRSXQ8N5I4 330 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SH3RF2Q8TEC5 729 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DOK4Q8TEW6 326 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TWIST2Q8WVJ9 160 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TP53INP1Q96A56 240 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 C19orf60Q96EN9 201 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 LINGO1Q96FE5 620 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SMARCD1Q96GM5 515 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CEP19Q96LK0 163 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZBTB18Q99592 522 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SMG9Q9H0W8 520 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CCSER2Q9H7U1 834 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NMUR1Q9HB89 426 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SPASTQ9UBP0 616 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 INVSQ9Y283 1065 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 AAR2Q9Y312 384 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FADS3Q9Y5Q0 445 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CEP250Q9BV73 2442 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NFASCO94856 1347 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SHROOM3Q8TF72 1996 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM247A6NEH6 219 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 A8MT66 165 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 XPNPEP2O43895 674 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 GABBR2O75899 941 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 SNAP29O95721 258 aa4.96□□□□□ -1.61
CCDC39-204ENST00000476379 AP2A1O95782 977 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms