RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PRSS38A1L453 326 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 LMO7DNF2Z398 122 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 H3BM21 787 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 SCAMP1O15126 338 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 CEACAM1P13688 526 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 TPH1P17752 444 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 ADRA1DP25100 572 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 NPY2RP49146 381 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 BASP1P80723 227 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 PEX6Q13608 980 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 PTPRCAPQ14761 206 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 TRIP13Q15645 432 aaPredicted RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 ATP13A5Q4VNC0 1218 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 CERCAMQ5T4B2 595 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 RNASEH2BQ5TBB1 312 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 LVRNQ6Q4G3 990 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 ENPP7Q6UWV6 458 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 CAND1Q86VP6 1230 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 FSTL5Q8N475 847 aaPredicted RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 FAM181AQ8N9Y4 354 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 PTCD2Q8WV60 388 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 PDXPQ96GD0 296 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 LRRC61Q9BV99 259 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 CLPBQ9H078 707 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 TCEAL2Q9H3H9 227 aaPredicted RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 CAAP1Q9H8G2 361 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 TRIM39Q9HCM9 518 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 BPIFA1Q9NP55 256 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 UCKL1Q9NWZ5 548 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 SPASTQ9UBP0 616 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 KLQ9UEF7 1012 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 OAS3Q9Y6K5 1087 aaKnown RBP16.8■□□□□ 0.28
SCAF11-206ENST00000474828 GLYATL1P3A0A0U1RQE8 302 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 HEATR9A2RTY3 570 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 CHUKO15111 745 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 TP73O15350 636 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 AQP9O43315 295 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 SH3BP5O60239 455 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 DNAJC6O75061 913 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 TMEM63AO94886 807 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 DKK1O94907 266 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 ITGA9Q13797 1035 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 TUBB2AQ13885 445 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 POU6F1Q14863 301 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 CHRNA6Q15825 494 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 INAVAQ3KP66 663 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 UAP1L1Q3KQV9 507 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 ZNF542PQ5EBM4 170 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 ANKRD22Q5VYY1 191 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 PPP1R21Q6ZMI0 780 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 NLRP9Q7RTR0 991 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 HOOK3Q86VS8 718 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 JAMLQ86YT9 394 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 RBFAQ8N0V3 343 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 DNAAF3Q8N9W5 541 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 DDHD1Q8NEL9 900 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 OR13C4Q8NGS5 318 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 OR4C6Q8NH72 309 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 TSACCQ96A04 125 aaPredicted RBP16.79■□□□□ 0.28
SCAF11-206ENST00000474828 TUBB2BQ9BVA1 445 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 SPATA16Q9BXB7 569 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 IL22Q9GZX6 179 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 MRM3Q9HC36 420 aaKnown RBP16.79■□□□□ 0.28
SCAF11-206ENST00000474828 NLGN3Q9NZ94 848 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 APOBEC3BQ9UH17 382 aaKnown RBP16.79■□□□□ 0.28
SCAF11-206ENST00000474828 BTBD3Q9Y2F9 522 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 CACNA1AO00555 2505 aa16.79■□□□□ 0.28
SCAF11-206ENST00000474828 NEMP2A6NFY4 417 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PRR19A6NJB7 356 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 DNALI1O14645 258 aaPredicted RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 BUD23O43709 281 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 SRP72O76094 671 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 TNFP01375 233 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 CA5AP35218 305 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 LMAN1P49257 510 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 IL9RQ01113 521 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 DR1Q01658 176 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 NFATC2Q13469 925 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PROX2Q3B8N5 592 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 GPR33Q49SQ1 333 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PYCR3Q53H96 274 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PCID2Q5JVF3 399 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 ALS2CLQ60I27 953 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 GATAD2AQ86YP4 633 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PHYKPLQ8IUZ5 450 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PPIL6Q8IXY8 311 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 OR13J1Q8NGT2 312 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 ZNF398Q8TD17 642 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 GPBAR1Q8TDU6 330 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 CDKN2AIPNLQ96HQ2 116 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 DNAJC1Q96KC8 554 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 CDC6Q99741 560 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 KIFC1Q9BW19 673 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 SLC13A1Q9BZW2 595 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 XAB2Q9HCS7 855 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 MRPL40Q9NQ50 206 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 PIH1D1Q9NWS0 290 aaKnown RBP16.78■□□□□ 0.28
SCAF11-206ENST00000474828 FKBPLQ9UIM3 349 aa16.78■□□□□ 0.28
SCAF11-206ENST00000474828 TCAF1Q9Y4C2 921 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms