RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 TMEM207Q6UWW9 146 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 RBFAQ8N0V3 343 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 TMEM151AQ8N4L1 468 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 GPR26Q8NDV2 337 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 C10orf82Q8WW14 230 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 BIRC8Q96P09 236 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 CLPBQ9H078 707 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 PCDH12Q9NPG4 1184 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 MUC22E2RYF6 1773 aaPredicted RBP19.68■□□□□ 0.74
SSR1-204ENST00000474597 C16orf96A6NNT2 1141 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 KPNA3O00505 521 aaPredicted RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 WISP3O95389 354 aaPredicted RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 C1SP09871 688 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TFEBP19484 476 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 CHRM3P20309 590 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 ABCE1P61221 599 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 ERAP2Q6P179 960 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TRPM8Q7Z2W7 1104 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 SFTPA1Q8IWL2 248 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 MICALL1Q8N3F8 863 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 SUSD6Q92537 303 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 SGF29Q96ES7 293 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 MSLNLQ96KJ4 702 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 PLEKHG4BQ96PX9 1271 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 ZNF395Q9H8N7 513 aaPredicted RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 TRMT6Q9UJA5 497 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 ATXN2Q99700 1313 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 A0A0G2JND7 137 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TMEM114B3SHH9 223 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TARM1B6A8C7 271 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 SBK3P0C264 359 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 KITP10721 976 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 UGT1A6P19224 532 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 UGT1A1P22309 533 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 UGT1A4P22310 534 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 ACRV1P26436 265 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 UGT1A3P35503 534 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 UGT1A5P35504 534 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 LTBRP36941 435 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 GRIA2P42262 883 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 SPINT3P49223 89 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TIAL1Q01085 375 aaKnown RBP eCLIP19.67■□□□□ 0.743e-7■■■□□ 14.9
SSR1-204ENST00000474597 ELAVL3Q14576 367 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 CTSL3PQ5NE16 218 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 C9orf64Q5T6V5 341 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 PTRHD1Q6GMV3 140 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 YTHDF3Q7Z739 585 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 RFWD2Q8NHY2 731 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 CCDC126Q96EE4 140 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 GPR21Q99679 349 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 RPP25Q9BUL9 199 aaKnown RBP19.67■□□□□ 0.74
SSR1-204ENST00000474597 GNPTGQ9UJJ9 305 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 REV3LO60673 3130 aa19.67■□□□□ 0.74
SSR1-204ENST00000474597 TCF20Q9UGU0 1960 aaKnown RBP19.66■□□□□ 0.74
SSR1-204ENST00000474597 C5orf42Q9H799 3197 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 ITM2AO43736 263 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 NIPSNAP2O75323 286 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 LYPLA1O75608 230 aaPredicted RBP19.66■□□□□ 0.74
SSR1-204ENST00000474597 HSPA4LO95757 839 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 ATP5F1P24539 256 aaPredicted RBP19.66■□□□□ 0.74
SSR1-204ENST00000474597 ARFIP2P53365 341 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 CSGALNACT1Q8TDX6 532 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 KCNJ9Q92806 393 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 C20orf27Q9GZN8 174 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 P2RY12Q9H244 342 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 TMEM245Q9H330 911 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 ALG9Q9H6U8 611 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 NUMBLQ9Y6R0 609 aa19.66■□□□□ 0.74
SSR1-204ENST00000474597 TRBV5-4A0A0C4DH59 114 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 F8W8V4 182 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 DLX3O60479 287 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 CD1DP15813 335 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 CD9P21926 228 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 SKIV2L2P42285 1042 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 GRIN2CQ14957 1233 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 SETDB1Q15047 1291 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 PAQR3Q6TCH7 311 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 DPPA4Q7L190 304 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 PARS2Q7L3T8 475 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 WDR75Q8IWA0 830 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 NKAPQ8N5F7 415 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 SMRP1Q8NCR6 262 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 TMIEQ8NEW7 156 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 PIP4K2CQ8TBX8 421 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 PPP1R16AQ96I34 528 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 RMDN2Q96LZ7 410 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 GATA5Q9BWX5 397 aaPredicted RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 SARS2Q9NP81 518 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 MARCOQ9UEW3 520 aaPredicted RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 SUN2Q9UH99 717 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 MTF2Q9Y483 593 aaPredicted RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 OAS3Q9Y6K5 1087 aaKnown RBP19.65■□□□□ 0.74
SSR1-204ENST00000474597 H3BMM5 538 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 DCTN3O75935 186 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 RPS3P23396 243 aaKnown RBP eCLIP19.65■□□□□ 0.742e-20■■■□□ 18.1
SSR1-204ENST00000474597 PFKPQ01813 784 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 DSG4Q86SJ6 1040 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 SPNS2Q8IVW8 549 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 NXPE1Q8N323 547 aa19.65■□□□□ 0.74
SSR1-204ENST00000474597 ULK4Q96C45 1275 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms