RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 VCYO14598 125 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 HSPA12AO43301 675 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 HCRTR2O43614 444 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ZG16O60844 167 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 MTA2O94776 668 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 VNN2O95498 520 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 G6PDP11413 515 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ALOX12P18054 663 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 GABRB1P18505 474 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 CD58P19256 250 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 MAOAP21397 527 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 GPTP24298 496 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 MCM3P25205 808 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 HNRNPH1P31943 449 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 PSMB10P40306 273 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 CDH8P55286 799 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ACVR2BQ13705 512 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 PDE1CQ14123 709 aaPredicted RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 DHX34Q14147 1143 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 IRF3Q14653 427 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 TOMM20Q15388 145 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 EIF2S3LQ2VIR3 472 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 KIAA0930Q6ICG6 404 aaPredicted RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 TMEM154Q6P9G4 183 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 SARM1Q6SZW1 724 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 B3GNT6Q6ZMB0 384 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 GLDNQ6ZMI3 551 aaPredicted RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 CLEC17AQ6ZS10 378 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 SEPT14Q6ZU15 432 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 DPPA4Q7L190 304 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 CHST9Q7L1S5 443 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 EXOC3L1Q86VI1 746 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ADGRF2Q8IZF7 708 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 NAGSQ8N159 534 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 OR14L1PQ8NHC6 308 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 POMGNT1Q8WZA1 660 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ZKSCAN4Q969J2 545 aaPredicted RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 IGSF8Q969P0 613 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 RRNAD1Q96FB5 475 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 ELMOD3Q96FG2 381 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 BICD1Q96G01 975 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 IFIH1Q9BYX4 1025 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 SH2D4AQ9H788 454 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 SLC28A3Q9HAS3 691 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 GPR108Q9NPR9 543 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 HINT3Q9NQE9 182 aaKnown RBP3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 SETD4Q9NVD3 440 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 CDC14AQ9UNH5 594 aa3.56□□□□□ -1.84
TMEM50B-208ENST00000474272 RSF1Q96T23 1441 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 hCG_1807616A0A1W2PRN6 198 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SCAMP1O15126 338 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 NDUFS3O75489 264 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SLC25A12O75746 678 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 PORP16435 677 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SSTR2P30874 369 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 RPL3P39023 403 aaKnown RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 DMP1Q13316 513 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 CUL4AQ13619 759 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 CRYMQ14894 314 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 KRT24Q2M2I5 525 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SETMARQ53H47 684 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SOWAHCQ53LP3 525 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 EFHC1Q5JVL4 640 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 PMS2CLQ68D20 193 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 JADE1Q6IE81 842 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 BRINP3Q76B58 766 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 FOXRED2Q8IWF2 684 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 KLHDC8BQ8IXV7 354 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 RPAP2Q8IXW5 612 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SPATA6LQ8N4H0 392 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 SRBD1Q8N5C6 995 aaKnown RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 TMEM68Q96MH6 324 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 ACOX2Q99424 681 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 PPP1R3EQ9H7J1 279 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 RCOR1Q9UKL0 485 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 ZNF215Q9UL58 517 aaPredicted RBP3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 MTMR6Q9Y217 621 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 NFS1Q9Y697 457 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 MAU2Q9Y6X3 613 aa3.55□□□□□ -1.84
TMEM50B-208ENST00000474272 C1orf226A1L170 272 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 ZIC3O60481 467 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 CLTBP09497 229 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 CSH1P0DML2 217 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 CSH2P0DML3 217 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 DGKAP23743 735 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 ACSL1P33121 698 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 ACTN2P35609 894 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 PEX5P50542 639 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 METAP2P50579 478 aaKnown RBP eCLIP3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 GALCP54803 685 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 PRAMEP78395 509 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 NEDD9Q14511 834 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 WTAPQ15007 396 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 C14orf177Q52M58 125 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 PPP6R3Q5H9R7 873 aaPredicted RBP3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 LRIF1Q5T3J3 769 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 FAM69BQ5VUD6 431 aa3.54□□□□□ -1.84
TMEM50B-208ENST00000474272 CFAP77Q6ZQR2 320 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms