RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 EIF2S3LQ2VIR3 472 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 ZSCAN23Q3MJ62 389 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 SETMARQ53H47 684 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 HYIQ5T013 277 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 SNX30Q5VWJ9 437 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 JADE1Q6IE81 842 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 FAM180BQ6P0A1 224 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 DUS1LQ6P1R4 473 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 BRAT1Q6PJG6 821 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 C1orf122Q6ZSJ8 110 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PLEKHM3Q6ZWE6 761 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 TUBA1AQ71U36 451 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 ARMC9Q7Z3E5 817 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PCDH20Q8N6Y1 951 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 TRPC4APQ8TEL6 797 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 IGSF8Q969P0 613 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 EVI5LQ96CN4 794 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 ORAI1Q96D31 301 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 NUDCD1Q96RS6 583 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 TUBA1CQ9BQE3 449 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 MAF1Q9H063 256 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 EIF2B3Q9NR50 452 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 MALT1Q9UDY8 824 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 OR14J1Q9UGF5 321 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 POU2F3Q9UKI9 436 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 ADAM18Q9Y3Q7 739 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 CKAP5Q14008 2032 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 A0A0G2JPF8 293 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 A0A1W2PS18 150 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 EIF4E1BA6NMX2 242 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 SRRM3A6NNA2 597 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 CDRT15L2A8MXV6 281 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 HMGB1P1B2RPK0 211 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 HNRNPCL2B2RXH8 293 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 HNRNPCL3B7ZW38 293 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 M0QZ24 198 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 SNAP23O00161 211 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 MID1O15344 667 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 TMCC2O75069 709 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 MLYCDO95822 493 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 SRPRAP08240 638 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 HNRNPCL4P0DMR1 293 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PLA2G2AP14555 144 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 IL7RP16871 459 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 CAPN3P20807 821 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 S1PR1P21453 382 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PSMB10P40306 273 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 EIF5P55010 431 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 TAS2R38P59533 333 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PITX1P78337 314 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 GAGE5Q13069 117 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 GAGE6Q13070 117 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 CDONQ4KMG0 1287 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF805Q5CZA5 627 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 CCDC30Q5VVM6 783 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 KLHL35Q6PF15 583 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PAPD4Q6PIY7 484 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PRSS57Q6UWY2 283 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 IKBIPQ70UQ0 350 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 HAPLN4Q86UW8 402 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 KMT5CQ86Y97 462 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 FOXRED2Q8IWF2 684 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 MCEMP1Q8IX19 187 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 CCDC13Q8IYE1 715 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 DCP1BQ8IZD4 617 aaKnown RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 MUC20Q8N307 709 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 METTL27Q8N6F8 245 aaPredicted RBP3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 OR1J2Q8NGS2 313 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 OR14L1PQ8NHC6 308 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 USP6NLQ92738 828 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 APBB2Q92870 758 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PIGTQ969N2 578 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 NEURL2Q9BR09 285 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 RETREG1Q9H6L5 497 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 EVA1AQ9H8M9 152 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF556Q9HAH1 456 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PLEKHA5Q9HAU0 1116 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 KCNG2Q9UJ96 466 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 FBXL2Q9UKC9 423 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PIAS3Q9Y6X2 628 aa3.24□□□□□ -1.89
ECHDC1-213ENST00000474240 PTPRCP08575 1304 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 CGNL1Q0VF96 1302 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ANKRD18BA2A2Z9 1011 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ANKRD66B4E2M5 251 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 HS6ST1O60243 411 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TSPAN9O75954 239 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 GAS8-AS1O95177 125 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 UGT1A1P22309 533 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 DGKAP23743 735 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 HOXA1P49639 335 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 MLLT10P55197 1068 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ERVFC1-1P60608 527 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 SREBF2Q12772 1141 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF234Q14588 700 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 MED22Q15528 200 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 ZRSR1Q15695 479 aaKnown RBP3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM35AQ53FP2 167 aa3.23□□□□□ -1.89
ECHDC1-213ENST00000474240 IRAK1BP1Q5VVH5 260 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms