RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 BRD8Q9H0E9 1235 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 ING2Q9H160 280 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 ZNF768Q9H5H4 540 aaKnown RBP13.81□□□□□ -0.2
SMURF1-203ENST00000472627 PDE7BQ9NP56 450 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 MLXIPLQ9NP71 852 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 VPS18Q9P253 973 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 CPNE7Q9UBL6 633 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 ZDHHC9Q9Y397 364 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 CRYBG3Q68DQ2 2970 aa13.81□□□□□ -0.2
SMURF1-203ENST00000472627 FBN2P35556 2912 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 ARGFXA6NJG6 315 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 EIF3CLB5ME19 914 aaKnown RBP13.8□□□□□ -0.2
SMURF1-203ENST00000472627 DFFAO00273 331 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 SNX2O60749 519 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 SPAG6O75602 509 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 C9P02748 559 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 FGF5P12034 268 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
SMURF1-203ENST00000472627 SEPHS1P49903 392 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 IL10RBQ08334 325 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 MAN2A1Q16706 1144 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 ZNF765Q7L2R6 523 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 CHST15Q7LFX5 561 aaPredicted RBP13.8□□□□□ -0.2
SMURF1-203ENST00000472627 TRIM48Q8IWZ4 208 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 IQCKQ8N0W5 287 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 EXD1Q8NHP7 514 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 ZNF599Q96NL3 588 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 TGM7Q96PF1 710 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 EIF3CQ99613 913 aaKnown RBP13.8□□□□□ -0.2
SMURF1-203ENST00000472627 TBC1D10AQ9BXI6 508 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 RMI1Q9H9A7 625 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 UCK1Q9HA47 277 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 TBC1D29Q9UFV1 150 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 FZD10Q9ULW2 581 aa13.8□□□□□ -0.2
SMURF1-203ENST00000472627 HIVEP3Q5T1R4 2406 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
SMURF1-203ENST00000472627 HTRA2O43464 458 aaPredicted RBP13.79□□□□□ -0.2
SMURF1-203ENST00000472627 UBXN7O94888 489 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 LHCGRP22888 699 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 PTPN4P29074 926 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 PER3P56645 1201 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 CDR2Q01850 454 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
SMURF1-203ENST00000472627 NR6A1Q15406 480 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 CPZQ66K79 652 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 NLRP8Q86W28 1048 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 BPHLQ86WA6 291 aaPredicted RBP13.79□□□□□ -0.2
SMURF1-203ENST00000472627 MARVELD3Q96A59 401 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 ZDHHC12Q96GR4 267 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 TCTN2Q96GX1 697 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 FCRL4Q96PJ5 515 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 SLC39A8Q9C0K1 460 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 ADAM22Q9P0K1 906 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 DNPEPQ9ULA0 475 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
SMURF1-203ENST00000472627 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 NPIPB15A6NHN6 443 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 EML2O95834 649 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 VIPP01282 170 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 CYP1A1P04798 512 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 CALB1P05937 261 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 ACP5P13686 325 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 ZNF30P17039 623 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 ZNF143P52747 638 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 GFERP55789 205 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 SH3BP2P78314 561 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 PRR30Q53SZ7 412 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 RALGPS1Q5JS13 557 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 ARMC12Q5T9G4 340 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 PRSS42Q7Z5A4 293 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 TRIM74Q86UV6 250 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 CBARPQ8N350 705 aaPredicted RBP13.78□□□□□ -0.2
SMURF1-203ENST00000472627 C3orf20Q8ND61 904 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 FNIP1Q8TF40 1166 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 NSMCE1Q8WV22 266 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 NDST4Q9H3R1 872 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 LUZP4Q9P127 313 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 TMEM63CQ9P1W3 806 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 CD84Q9UIB8 345 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 RARRES3Q9UL19 164 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 KCNK6Q9Y257 313 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 FHOD1Q9Y613 1164 aa13.78□□□□□ -0.2
SMURF1-203ENST00000472627 ANKUB1A6NFN9 424 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 F8VZ95 297 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 CCP110O43303 1012 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 UCHL3P15374 230 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 TYRP1P17643 537 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 RRADP55042 308 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 SYCP1Q15431 976 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 KLHDC7AQ5VTJ3 777 aa13.77□□□□□ -0.21
SMURF1-203ENST00000472627 CACHD1Q5VU97 1274 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms