RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PDE2AO00408 941 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 GCNT3O95395 438 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ADCY5O95622 1261 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 TSPAN12O95859 305 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 RHOCP08134 193 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 HOXC4P09017 264 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ATXN8OSP0DMR3 200 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 XPAP23025 273 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ERCC5P28715 1186 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 HADHAP40939 763 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ASPAP45381 313 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 LIG3P49916 1009 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 TNFSF10P50591 281 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 SLC8A3P57103 927 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ACY1Q03154 408 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 MFAP5Q13361 173 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 NCOA4Q13772 614 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 TOB2Q14106 344 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 PTCHD3Q3KNS1 767 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ZC3H12AQ5D1E8 599 aaKnown RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 FBXL22Q6P050 247 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ISLR2Q6UXK2 745 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 PPP1R32Q7Z5V6 425 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 BPHLQ86WA6 291 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 SYTL1Q8IYJ3 562 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 MARVELD2Q8N4S9 558 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 THAP3Q8WTV1 239 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 HDAC10Q969S8 669 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 PERPQ96FX8 193 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF274Q96GC6 653 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 ZNF514Q96K75 400 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-206ENST00000471968 BTN2A3PQ96KV6 586 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 GPR137Q96N19 417 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 LRFN5Q96NI6 719 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 SERPINB11Q96P15 392 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 CEP44Q9C0F1 390 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 CBLCQ9ULV8 474 aa6.47□□□□□ -1.37
HDAC3-206ENST00000471968 A0A087X1B8 175 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 A0A0D9SEW6 157 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 DYTNA2CJ06 578 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 C9J4A7 227 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PRRG2O14669 202 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 KIAA0391O15091 583 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 TLX2O43763 284 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 DNAJB6O75190 326 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 KLF7O75840 302 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 UBXN7O94888 489 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 KLHL18O94889 574 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 F10P00742 488 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 MYCLP1P12525 358 aaPredicted RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 LCP1P13796 627 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 AMD1P17707 334 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 RORAP35398 523 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 TRIM23P36406 574 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SERPINH1P50454 418 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 CASP5P51878 434 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 DAOAP59103 153 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 MCM6Q14566 821 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PSMD6Q15008 389 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 AGERQ15109 404 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SNRNP35Q16560 246 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 FILIP1LQ4L180 1135 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 TMEM119Q4V9L6 283 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 ZNF394Q53GI3 561 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SPOPLQ6IQ16 392 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 IRGCQ6NXR0 463 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 GDPD4Q6W3E5 623 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 CERS6Q6ZMG9 384 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SLC9B2Q86UD5 537 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PELI3Q8N2H9 469 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 GUF1Q8N442 669 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 TTC30BQ8N4P2 665 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 DCAF4L2Q8NA75 395 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PLEKHO2Q8TD55 490 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 DQX1Q8TE96 717 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 CPT1BQ92523 772 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 HMCESQ96FZ2 354 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PRMT1Q99873 361 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 LHPPQ9H008 270 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SLC6A20Q9NP91 592 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 SEPT11Q9NVA2 429 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PTGFRNQ9P2B2 879 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 CNOT8Q9UFF9 292 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 FBXL4Q9UKA2 621 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 TBC1D30Q9Y2I9 924 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 PTRH2Q9Y3E5 179 aaKnown RBP6.46□□□□□ -1.38
HDAC3-206ENST00000471968 ACTL7AQ9Y615 435 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 ABCA1O95477 2261 aa6.46□□□□□ -1.38
HDAC3-206ENST00000471968 IGHV5-51A0A0C4DH38 117 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 C17orf113A0A1B0GUU1 675 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 LILRA5A6NI73 299 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 AGPSO00116 658 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 PIK3R2O00459 728 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 CLDN11O75508 207 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 RECQL5O94762 991 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 ASS1P00966 412 aaKnown RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 SOX18P35713 384 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 GGCXP38435 758 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms