RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TCTN1Q2MV58 587 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 HSP90AB4PQ58FF6 505 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 OTUD3Q5T2D3 398 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-202ENST00000471307 TMEM81Q6P7N7 255 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 CPLX2Q6PUV4 134 aaKnown RBP5.51□□□□□ -1.53
CCDC39-202ENST00000471307 LINGO2Q7L985 606 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 SMIM29Q86T20 159 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 PLD5Q8N7P1 536 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF441Q8N8Z8 693 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 ANKRD42Q8N9B4 389 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 NEK9Q8TD19 979 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 GCC1Q96CN9 775 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 UHRF2Q96PU4 802 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 CSF3RQ99062 836 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 EPYCQ99645 322 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 KXD1Q9BQD3 176 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 UBA5Q9GZZ9 404 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 MCM9Q9NXL9 1143 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 ERRFI1Q9UJM3 462 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-202ENST00000471307 SLIT2O94813 1529 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 NWD2Q9ULI1 1742 aa5.51□□□□□ -1.53
CCDC39-202ENST00000471307 AKR1B15C9JRZ8 316 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 SOCS6O14544 535 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 MID1O15344 667 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 URODP06132 367 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 GALTP07902 379 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 HSP90AB1P08238 724 aaKnown RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 IFIT1P09914 478 aaKnown RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 IRF1P10914 325 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 CDH15P55291 814 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 TLE2Q04725 743 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 ZRSR2Q15696 482 aaKnown RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 C1orf141Q5JVX7 400 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF530Q6P9A1 599 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 GDPD4Q6W3E5 623 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 B3GNT6Q6ZMB0 384 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 MTSS1LQ765P7 747 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 RRM2BQ7LG56 351 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 MAB21L3Q8N8X9 362 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 TMEM19Q96HH6 336 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 BBS4Q96RK4 519 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 SPRY4Q9C004 299 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 MKKSQ9NPJ1 570 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 DDX4Q9NQI0 724 aaKnown RBP5.5□□□□□ -1.53
CCDC39-202ENST00000471307 C1RLQ9NZP8 487 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 HSF4Q9ULV5 492 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 STON1Q9Y6Q2 735 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 DLG5Q8TDM6 1919 aa5.5□□□□□ -1.53
CCDC39-202ENST00000471307 WDR81Q562E7 1941 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 A0A0G2JPF8 293 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 FAM172BPA6NC97 362 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 GOLGA6L9A6NEM1 432 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 HNRNPCL3B7ZW38 293 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 HNRNPCL1O60812 293 aaKnown RBP5.49□□□□□ -1.53
CCDC39-202ENST00000471307 HNRNPCL4P0DMR1 293 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 TCEA1P23193 301 aaKnown RBP5.49□□□□□ -1.53
CCDC39-202ENST00000471307 GABRB2P47870 512 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 CCT5P48643 541 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF132P52740 706 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 BRWD1-AS2P59051 145 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 VAMP2P63027 116 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 GRIK3Q13003 919 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 TXNDC8Q6A555 127 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 LRRC8EQ6NSJ5 796 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 MEX3BQ6ZN04 569 aaKnown RBP5.49□□□□□ -1.53
CCDC39-202ENST00000471307 NOXA1Q86UR1 476 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 DSELQ8IZU8 1212 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 SPATA22Q8NHS9 363 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 FUZQ9BT04 418 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 HAUS8Q9BT25 410 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 NUF2Q9BZD4 464 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 MMP28Q9H239 520 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 MAGEE1Q9HCI5 957 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 CNGB3Q9NQW8 809 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 PPP1R14DQ9NXH3 145 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 SLC25A10Q9UBX3 287 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-202ENST00000471307 FAM96BQ9Y3D0 163 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 MAP3K5Q99683 1374 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 BCL9LQ86UU0 1499 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 PLCH1Q4KWH8 1693 aa5.49□□□□□ -1.53
CCDC39-202ENST00000471307 OVOS2A0A0G2JMS6 1433 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 LRP6O75581 1613 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF587BE7ETH6 402 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 EIF3FO00303 357 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 BCAT2O15382 392 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 LMX1BO60663 402 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 ZNF853P0CG23 659 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 TAF7Q15545 349 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 TAF12Q16514 161 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 SGO1Q5FBB7 561 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 STPG1Q5TH74 334 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 MCM10Q7L590 875 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 CHERPQ8IWX8 916 aaKnown RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 ZCCHC9Q8N567 271 aaKnown RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 IL17REQ8NFR9 667 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 SH3GL2Q99962 352 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 GPR63Q9BZJ6 419 aa5.48□□□□□ -1.53
CCDC39-202ENST00000471307 ESRP2Q9H6T0 727 aaKnown RBP5.48□□□□□ -1.53
CCDC39-202ENST00000471307 SDF2L1Q9HCN8 221 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms