RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ZFP36L1Q07352 338 aaKnown RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 AP1B1Q10567 949 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 LRP8Q14114 963 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 TFDP2Q14188 446 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 NR1D2Q14995 579 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 PTPRRQ15256 657 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SOWAHCQ53LP3 525 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 GPR155Q7Z3F1 870 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 ZNF438Q7Z4V0 828 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SPRED1Q7Z699 444 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 CNTD1Q8N815 330 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 ACRBPQ8NEB7 543 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 LPCAT1Q8NF37 534 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 KCNE4Q8WWG9 221 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SCAMP4Q969E2 229 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 IMP4Q96G21 291 aaKnown RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 COX14Q96I36 57 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SRPK1Q96SB4 655 aaKnown RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 LUC7LQ9NQ29 371 aaKnown RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SPATS2LQ9NUQ6 558 aaKnown RBP13.42□□□□□ -0.26
HMGN1-211ENST00000471260 VPS18Q9P253 973 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 CD84Q9UIB8 345 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 PCDHGA7Q9Y5G6 932 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 RNF215Q9Y6U7 377 aa13.42□□□□□ -0.26
HMGN1-211ENST00000471260 PTPRQQ9UMZ3 2332 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 C1orf232A0A0U1RR37 186 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RHPN2P1A8MT19 583 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TK2O00142 265 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 SPOPO43791 374 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TNFSF15O95150 251 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 MAGEA1P43355 309 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 SPINT3P49223 89 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 B4GALNT1Q00973 533 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 ZBTB17Q13105 803 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TAZQ16635 292 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 QPCTQ16769 361 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 MAP9Q49MG5 647 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 PYCR3Q53H96 274 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 HENMT1Q5T8I9 393 aaKnown RBP13.41□□□□□ -0.26
HMGN1-211ENST00000471260 WDR93Q6P2C0 686 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RFLNAQ6ZTI6 216 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RAB11FIP2Q7L804 512 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RFX6Q8HWS3 928 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 FBXO39Q8N4B4 442 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 Q8N9G6 341 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-211ENST00000471260 TADA1Q96BN2 335 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 FCRL3Q96P31 734 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-211ENST00000471260 OR2M4Q96R27 311 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
HMGN1-211ENST00000471260 SLC25A51Q9H1U9 297 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 FAM83DQ9H4H8 585 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RMI1Q9H9A7 625 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 MAGEE1Q9HCI5 957 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 RAD18Q9NS91 495 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 ACSL6Q9UKU0 697 aa13.41□□□□□ -0.26
HMGN1-211ENST00000471260 A0A0A6YYK5 440 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 A0A0U1RQS6 177 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 MAP2K7O14733 419 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CASC3O15234 703 aaKnown RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 MTSS1O43312 755 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 ECEL1O95672 775 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CPNE6O95741 557 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 COMTP21964 271 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 AK4P27144 223 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CDKN2BP42772 138 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 NOP2P46087 812 aaKnown RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 POLD2P49005 469 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 BIRC2Q13490 618 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 PAPD7Q5XG87 772 aaKnown RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 SLC30A9Q6PML9 568 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 B3GNT8Q7Z7M8 397 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 PIM3Q86V86 326 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 GALNT13Q8IUC8 556 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 NAGSQ8N159 534 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 LRRN4Q8WUT4 740 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 SNRNP27Q8WVK2 155 aaKnown RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CALR3Q96L12 384 aaKnown RBP13.4□□□□□ -0.26
HMGN1-211ENST00000471260 AGAP3Q96P47 875 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 SMIM14Q96QK8 99 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 TRIB3Q96RU7 358 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 CMKLR1Q99788 373 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 DPYSL5Q9BPU6 564 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 PARD6BQ9BYG5 372 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 B3GNT4Q9C0J1 378 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 EPB41L5Q9HCM4 733 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 ALG6Q9Y672 507 aa13.4□□□□□ -0.26
HMGN1-211ENST00000471260 KIF26BQ2KJY2 2108 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 EIF4E1BA6NMX2 242 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 GPR89AB7ZAQ6 455 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 NVLO15381 856 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms