RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-220ENST00000471235 TRIM38O00635 465 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 LDB2O43679 373 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 PPFIA2O75334 1257 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 FUCA1P04066 466 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 IVLP07476 585 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CASQ1P31415 396 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CDH17Q12864 832 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 SEPT6Q14141 434 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 POU6F1Q14863 301 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 ZDHHC20Q5W0Z9 365 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 FAM151BQ6UXP7 276 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 GLRX5Q86SX6 157 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 FSTL5Q8N475 847 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-220ENST00000471235 OR13C4Q8NGS5 318 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 GRK7Q8WTQ7 553 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 GLYATL1Q969I3 302 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CDC6Q99741 560 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 SUDS3Q9H7L9 328 aaPredicted RBP19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CARS2Q9HA77 564 aaKnown RBP19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CASS4Q9NQ75 786 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 NLGN3Q9NZ94 848 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 FKBPLQ9UIM3 349 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 TMPRSS11EQ9UL52 423 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 SUFUQ9UMX1 484 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 CACNA1AO00555 2505 aa19.6■□□□□ 0.73
HDAC7-220ENST00000471235 GLYATL1P3A0A0U1RQE8 302 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 NEMP2A6NFY4 417 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 GPR39O43194 453 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 SIGLEC6O43699 453 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 CTSEP14091 401 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 TPSB2P20231 275 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 GNPDA1P46926 289 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 GPS1Q13098 491 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 TRIP6Q15654 476 aaKnown RBP19.59■□□□□ 0.73
HDAC7-220ENST00000471235 TPSAB1Q15661 275 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 CHRNA6Q15825 494 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 DEFB133Q30KQ1 61 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 HS1BP3Q53T59 392 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 PHYKPLQ8IUZ5 450 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 DNAAF3Q8N9W5 541 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 DTX3LQ8TDB6 740 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 SCARF2Q96GP6 870 aaPredicted RBP19.59■□□□□ 0.73
HDAC7-220ENST00000471235 CNDP2Q96KP4 475 aaKnown RBP19.59■□□□□ 0.73
HDAC7-220ENST00000471235 C16orf45Q96MC5 204 aaPredicted RBP19.59■□□□□ 0.73
HDAC7-220ENST00000471235 VPS35Q96QK1 796 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 ARFGAP3Q9NP61 516 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 VPS18Q9P253 973 aa19.59■□□□□ 0.73
HDAC7-220ENST00000471235 SPTBN2O15020 2390 aa19.58■□□□□ 0.73
HDAC7-220ENST00000471235 LMO7DNF2Z398 122 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 ASMTLO95671 621 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 ECEL1O95672 775 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 GAS8O95995 478 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 ALPPL2P10696 532 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 PDE1BQ01064 536 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 KCNJ11Q14654 390 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 ELOCQ15369 112 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 PROX2Q3B8N5 592 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 CERCAMQ5T4B2 595 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 ZNF648Q5T619 568 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-220ENST00000471235 MARK2Q7KZI7 788 aaKnown RBP19.58■□□□□ 0.72
HDAC7-220ENST00000471235 DNAJC1Q96KC8 554 aaKnown RBP19.58■□□□□ 0.72
HDAC7-220ENST00000471235 C19orf43Q9BQ61 176 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 TMEM168Q9H0V1 697 aa19.58■□□□□ 0.72
HDAC7-220ENST00000471235 PCYT1BQ9Y5K3 369 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-220ENST00000471235 COL27A1Q8IZC6 1860 aaPredicted RBP19.58■□□□□ 0.72
HDAC7-220ENST00000471235 RP1P56715 2156 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 TCRBV7S3A2A0A539 114 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 CCL22O00626 93 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 TNFSF14O43557 240 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 SLC25A14O95258 325 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-220ENST00000471235 PRAMEF1O95521 474 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 LDOC1O95751 146 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-220ENST00000471235 ANXA6P08133 673 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 CA5AP35218 305 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 PAFAH1B1P43034 410 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 MAGEA6P43360 314 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 TERF1P54274 439 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 SIM1P81133 766 aaPredicted RBP19.57■□□□□ 0.72
HDAC7-220ENST00000471235 TMPRSS15P98073 1019 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 KHDC1Q4VXA5 237 aaKnown RBP19.57■□□□□ 0.72
HDAC7-220ENST00000471235 MICALCLQ6ZW33 695 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 ZNF534Q76KX8 674 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 CCL4L1Q8NHW4 92 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 SLCO2A1Q92959 643 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 OR2M4Q96R27 311 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 DUSP23Q9BVJ7 150 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 TOR4AQ9NXH8 423 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 RNF14Q9UBS8 474 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 PCYOX1Q9UHG3 505 aa19.57■□□□□ 0.72
HDAC7-220ENST00000471235 CCDC78A2IDD5 438 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 MROH6A6NGR9 719 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 TPP1O14773 563 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 YY2O15391 372 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 DNAJC6O75061 913 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 FTH1P19P0C7X4 201 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 XIAPP98170 497 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 ITGA9Q13797 1035 aa19.56■□□□□ 0.72
HDAC7-220ENST00000471235 CCDC38Q502W7 563 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms