RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ATG2AQ2TAZ0 1938 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 CHD9Q3L8U1 2897 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TRANK1O15050 2925 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TRGV11A0A075B6L2 103 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TMEM221A6NGB7 291 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 HEPACAM2A8MVW5 462 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 M0R296 226 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 CLDN5O00501 218 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 XPO1O14980 1071 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MATN3O15232 486 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 CHADO15335 359 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TRIAP1O43715 76 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 NFATC1O95644 943 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 GLULP15104 373 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ATF6P18850 670 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 PPIFP30405 207 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 GDI1P31150 447 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 STAT1P42224 750 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MAGEA9P43362 315 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 HARS2P49590 506 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 COG7P83436 770 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TAF10Q12962 218 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MTA1Q13330 715 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 BIRC2Q13490 618 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 HTR4Q13639 388 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 PDGFRLQ15198 375 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 KRT31Q15323 416 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ZSCAN23Q3MJ62 389 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 FAM78AQ5JUQ0 283 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 C10orf120Q5SQS8 335 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 C1orf220Q5T0J3 134 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 SDHAF4Q5VUM1 108 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 IZUMO3Q5VZ72 239 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ARHGAP17Q68EM7 881 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 IGFL4Q6B9Z1 124 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 HIBCHQ6NVY1 386 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 LAYNQ6UX15 382 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MFSD6LQ8IWD5 586 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 SLC44A3Q8N4M1 653 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 C12orf29Q8N999 325 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TMEM35BQ8NCS4 154 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 SEMA4DQ92854 862 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 FAM149B1Q96BN6 582 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 DDX50Q9BQ39 737 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 PTDSS2Q9BVG9 487 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 NUP58Q9BVL2 599 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 UBXN6Q9BZV1 441 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 DCLK3Q9C098 648 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 VPS11Q9H270 941 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ARHGEF3Q9NR81 526 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 FAM207AQ9NSI2 230 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 SAMSN1Q9NSI8 373 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TMLHEQ9NVH6 421 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 ZNHIT6Q9NWK9 470 aaKnown RBP6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MYO1AQ9UBC5 1043 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MID2Q9UJV3 735 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 DNAJC12Q9UKB3 198 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TSPAN16Q9UKR8 245 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 SCML2Q9UQR0 700 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 MYH10P35580 1976 aa6.44□□□□□ -1.38
PTCD3-208ENST00000469585 TSC2P49815 1807 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 PIPSLA2A3N6 862 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 LGALS16A8MUM7 142 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ANHXE9PGG2 379 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 APOL1O14791 398 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CCP110O43303 1012 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 NARSO43776 548 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TLR5O60602 858 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 RASSF9O75901 435 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 UCHL3P15374 230 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 GJA1P17302 382 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 BTF3P20290 206 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 PON1P27169 355 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CHKAP35790 457 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TKTL1P51854 596 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 DGKEP52429 567 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 COPB1P53618 953 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 RAD23BP54727 409 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 UBASH3AP57075 661 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 POLR2FP61218 127 aaKnown RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 GRSF1Q12849 480 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF268Q14587 947 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 MLF2Q15773 248 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 MEA1Q16626 185 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 SLC5A9Q2M3M2 681 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ITPRIPL2Q3MIP1 535 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 LY6G5CQ5SRR4 150 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TXNDC8Q6A555 127 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 PARM1Q6UWI2 310 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 LCLAT1Q6UWP7 414 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 TRIM72Q6ZMU5 477 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 CLEC20AQ6ZU45 233 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 C11orf57Q6ZUT1 292 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF677Q86XU0 584 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 SDR16C5Q8N3Y7 309 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 LNX2Q8N448 690 aa6.43□□□□□ -1.38
PTCD3-208ENST00000469585 ZNF557Q8N988 423 aaPredicted RBP6.43□□□□□ -1.38
PTCD3-208ENST00000469585 SLC4A11Q8NBS3 891 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms