RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 IYDQ6PHW0 289 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 NLRP8Q86W28 1048 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 EID2BQ96D98 161 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 NUP85Q9BW27 656 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 DDA1Q9BW61 102 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 ASPSCR1Q9BZE9 553 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 EPN3Q9H201 632 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 PRDM8Q9NQV8 689 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 ANAPC7Q9UJX3 599 aa12.16□□□□□ -0.46
HDAC3-204ENST00000469207 MRPS18BQ9Y676 258 aaKnown RBP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 TLN1Q9Y490 2541 aaKnown RBP12.16□□□□□ -0.46
HDAC3-204ENST00000469207 MATN3O15232 486 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 MYBL1P10243 752 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 ACP5P13686 325 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 F8A1P23610 371 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 SERPINB6P35237 376 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 GARSP41250 739 aaKnown RBP12.15□□□□□ -0.46
HDAC3-204ENST00000469207 MC2RQ01718 297 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 DPYSL3Q14195 570 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 NDUFAF2Q8N183 169 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 CCDC112Q8NEF3 446 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 OR10G6Q8NH81 332 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 ZNF564Q8TBZ8 553 aaPredicted RBP12.15□□□□□ -0.46
HDAC3-204ENST00000469207 CPLX3Q8WVH0 158 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 TEKT4Q8WW24 435 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 MAML1Q92585 1016 aa12.15□□□□□ -0.46
HDAC3-204ENST00000469207 TDRD1Q9BXT4 1180 aaKnown RBP12.15□□□□□ -0.46
HDAC3-204ENST00000469207 SCHIP1Q9P0W5 487 aaPredicted RBP12.15□□□□□ -0.46
HDAC3-204ENST00000469207 A0A087X0T9 212 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 C1orf232A0A0U1RR37 186 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 A0A1B0GTH6 734 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 A6NCN8 305 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF891A8MT65 544 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 MMP2P08253 660 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 FAM228BP0C875 321 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF28P17035 718 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF30P17039 623 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 OAS2P29728 719 aaKnown RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 CCR10P46092 362 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 SPINT3P49223 89 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF165P49910 485 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 GFERP55789 205 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 TAS2R40P59535 323 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 GBE1Q04446 702 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 GALNT2Q10471 571 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 PEX6Q13608 980 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 PAFAH1B3Q15102 231 aaKnown RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 QPCTQ16769 361 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 DEFB109BQ30KR1 87 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 FILIP1LQ4L180 1135 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 TDRD12Q587J7 1177 aaKnown RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ANKRD20A8PQ5CZ79 823 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 WDR74Q6RFH5 385 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 B4GALNT4Q76KP1 1039 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF765Q7L2R6 523 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 KDELC2Q7Z4H8 507 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 NLGN4XQ8N0W4 816 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 NIPA2Q8N8Q9 360 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 NLGN4YQ8NFZ3 816 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 FAM71BQ8TC56 605 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 TRIM11Q96F44 468 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 SLC45A3Q96JT2 553 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 BRD8Q9H0E9 1235 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 GPN2Q9H9Y4 310 aaPredicted RBP12.14□□□□□ -0.47
HDAC3-204ENST00000469207 PCDH9Q9HC56 1237 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 ATXN10Q9UBB4 475 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 SLC23A2Q9UGH3 650 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 IP6K2Q9UHH9 426 aa12.14□□□□□ -0.47
HDAC3-204ENST00000469207 UBR5O95071 2799 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-204ENST00000469207 K7EM74 188 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 STK17BO94768 372 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 JCHAINP01591 159 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 CYP1A2P05177 515 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 PIRTP0C851 137 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 ZNF8P17098 575 aaPredicted RBP12.13□□□□□ -0.47
HDAC3-204ENST00000469207 TYRP1P17643 537 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 CCNCP24863 283 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 CD86P42081 329 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 LRP8Q14114 963 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 HENMT1Q5T8I9 393 aaKnown RBP12.13□□□□□ -0.47
HDAC3-204ENST00000469207 ALS2CLQ60I27 953 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 ALG1LQ6GMV1 187 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 LYSMD3Q7Z3D4 306 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 PQLC3Q8N755 202 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 PLEKHG4BQ96PX9 1271 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 DPYSL5Q9BPU6 564 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 CEP41Q9BYV8 373 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 ADNPQ9H2P0 1102 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 FAM83DQ9H4H8 585 aa12.13□□□□□ -0.47
HDAC3-204ENST00000469207 SARS2Q9NP81 518 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms