RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SMPD3Q9NY59 655 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 DTLQ9NZJ0 730 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MAT2BQ9NZL9 334 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PI4KBQ9UBF8 816 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 ARPP21Q9UBL0 812 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 EIF3KQ9UBQ5 218 aaKnown RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MAD2L2Q9UI95 211 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PHF11Q9UIL8 331 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 FBXO5Q9UKT4 447 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PCDHB12Q9Y5F1 795 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PEX16Q9Y5Y5 336 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 AUP1Q9Y679 476 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 PLIN4Q96Q06 1357 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 MEGF6O75095 1541 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 C5P01031 1676 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 TRPM3Q9HCF6 1732 aaPredicted RBP4.85□□□□□ -1.63
SF3B1-207ENST00000468925 EP400Q96L91 3159 aa4.85□□□□□ -1.63
SF3B1-207ENST00000468925 DUOX1Q9NRD9 1551 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PXDNQ92626 1479 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 SPATA31A5Q5VU36 1347 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 SPATA31A7Q8IWB4 1347 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 IGSF9BQ9UPX0 1349 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 RNF103-CHMP3A0A140T963 221 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 A0A1B0GVM2 712 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TYW5A2RUC4 315 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 KLRG2A4D1S0 409 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 OR6C65A6NJZ3 312 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 CLDN24A6NM45 220 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PP2D1A8MPX8 630 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TCP10L2B9ZVM9 353 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 KBTBD13C9JR72 458 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 H0Y858 1186 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 UBE2Q2LH0YL09 131 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 BTN3A1O00481 513 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 AURKAO14965 403 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 KPNA5O15131 536 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 CHADO15335 359 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GATCO43716 136 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 NBNO60934 754 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 BCAS1O75363 584 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 RFPL3O75679 317 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PDE8BO95263 885 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 SEC24AO95486 1093 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PF4P02776 101 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 ANXA1P04083 346 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 WEE2P0C1S8 567 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PLA2G4BP0C869 781 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TRIM49P0CI25 452 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TRIM49CP0CI26 452 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TGFB3P10600 412 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MTHFD1P11586 935 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 ITGB6P18564 788 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 NCF2P19878 526 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TGM2P21980 687 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GLRA2P23416 452 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 EEF1B2P24534 225 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PSMA4P25789 261 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 RPL22P35268 128 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GARSP41250 739 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PTPN9P43378 593 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 YAP1P46937 504 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 NPTX2P47972 431 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 HCAR3P49019 387 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PPM1FP49593 454 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 HOXA1P49639 335 aaPredicted RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 SERPINH1P50454 418 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 OR2B6P58173 313 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GPX6P59796 221 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MYL6P60660 151 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 ABCE1P61221 599 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MYL7Q01449 175 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 CNTN2Q02246 1040 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PPP3CAQ08209 521 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MRPL28Q13084 256 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TNK1Q13470 666 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 BFSP2Q13515 415 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 STK11Q15831 433 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 ATP6AP1Q15904 470 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 PGS1Q32NB8 556 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 RFX4Q33E94 735 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TBRG1Q3YBR2 411 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 SEZ6Q53EL9 994 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 KLHL12Q53G59 568 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 TFDP3Q5H9I0 405 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 ARMCX4Q5H9R4 360 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 UBAP2Q5T6F2 1119 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GRTP1Q5TC63 336 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 CACHD1Q5VU97 1274 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MRM1Q6IN84 353 aaKnown RBP4.84□□□□□ -1.63
SF3B1-207ENST00000468925 FAM45BPQ6NSW5 357 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 DCUN1D2Q6PH85 259 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 NAPRTQ6XQN6 538 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 MACC1Q6ZN28 852 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 FRMD7Q6ZUT3 714 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 DENND5BQ6ZUT9 1274 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 LHFPL2Q6ZUX7 228 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 POLNQ7Z5Q5 900 aa4.84□□□□□ -1.63
SF3B1-207ENST00000468925 GLRX5Q86SX6 157 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms