RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NCKIPSDQ9NZQ3 722 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 KLQ9UEF7 1012 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 AMFRQ9UKV5 643 aa11.11□□□□□ -0.63
COL4A6-205ENST00000468338 ASPMQ8IZT6 3477 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 TMEM8BA6NDV4 472 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 GOLGA6L6A8MZA4 724 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 NDST3O95803 873 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 TNFP01375 233 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CEACAM5P06731 702 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 PYGLP06737 847 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CELA2BP08218 269 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 SPINT3P49223 89 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 DUSP3P51452 185 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 DAB2P98082 770 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 INSM1Q01101 510 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 OTUD4Q01804 1114 aaKnown RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CDK18Q07002 472 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 KLF1Q13351 362 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 ELOCQ15369 112 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 DEFB133Q30KQ1 61 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 HENMT1Q5T8I9 393 aaKnown RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CDCP2Q5VXM1 449 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 DENND2CQ68D51 928 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 OGFOD3Q6PK18 319 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 PEX26Q7Z412 305 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 SLC35F3Q8IY50 421 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 AP2M1Q96CW1 435 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 ITPKCQ96DU7 683 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 COX14Q96I36 57 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 TRNAU1APQ9NX07 287 aaKnown RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 SEPT10Q9P0V9 454 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 NFKBIL1Q9UBC1 381 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 TRHDEQ9UKU6 1024 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CNOT6Q9ULM6 557 aaKnown RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 SLC17A4Q9Y2C5 497 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 CAPN6Q9Y6Q1 641 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 UNC13CQ8NB66 2214 aa11.1□□□□□ -0.63
COL4A6-205ENST00000468338 COL27A1Q8IZC6 1860 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-205ENST00000468338 URB1O60287 2271 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 ZFC3H1O60293 1989 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 C1orf232A0A0U1RR37 186 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 PRSS38A1L453 326 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 TJP3O95049 919 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 PDGFAP04085 211 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 RPLP1P05386 114 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 IVLP07476 585 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 ANXA6P08133 673 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 MYF5P13349 255 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 CTSEP14091 401 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 NFKB1P19838 968 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 RBL1P28749 1068 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 GPR1P46091 355 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 GALNT3Q14435 633 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 HIF1AQ16665 826 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 RAET1GQ6H3X3 334 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 AADACL2Q6P093 401 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 PID1Q7Z2X4 250 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 KLHDC8BQ8IXV7 354 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 UBL4BQ8N7F7 174 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 DCBLD1Q8N8Z6 715 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 GPBAR1Q8TDU6 330 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 HAUS1Q96CS2 278 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 SRPK1Q96SB4 655 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 RIOK2Q9BVS4 552 aaKnown RBP11.09□□□□□ -0.63
COL4A6-205ENST00000468338 TMEM168Q9H0V1 697 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 CDH19Q9H159 772 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 ZFYVE1Q9HBF4 777 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 DKK4Q9UBT3 224 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 FAM153AQ9UHL3 310 aa11.09□□□□□ -0.63
COL4A6-205ENST00000468338 SCN8AQ9UQD0 1980 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 KMT2BQ9UMN6 2715 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 FAM149AA5PLN7 773 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 KRT86O43790 486 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 OPA1O60313 960 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 PMPCBO75439 489 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 FTCDO95954 541 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 RBP3P10745 1247 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CETN2P41208 172 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 WNT3AP56704 352 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 DCDC1P59894 354 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CCZ1BP86790 482 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CCZ1P86791 482 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 MPP3Q13368 585 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 NR0B2Q15466 257 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 CCDC157Q569K6 752 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 HES3Q5TGS1 186 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 GUSBP11Q6P575 273 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 LYSMD3Q7Z3D4 306 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 RD3Q7Z3Z2 195 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 C17orf82Q86X59 251 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-205ENST00000468338 GKN2Q86XP6 184 aa11.08□□□□□ -0.64
COL4A6-205ENST00000468338 MARCH9Q86YJ5 346 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms