RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 PRLP01236 227 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 TRBC1P01850 177 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 PYGLP06737 847 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 ATP1A3P13637 1013 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 ZNF30P17039 623 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 BIRC2Q13490 618 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 SEPT6Q14141 434 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 DPYSL2Q16555 572 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 SNAP47Q5SQN1 464 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
UBR4-211ENST00000467272 DENND2CQ68D51 928 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 ASB18Q6ZVZ8 466 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
UBR4-211ENST00000467272 IRF2BP2Q7Z5L9 587 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 TMEM135Q86UB9 458 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 EXD1Q8NHP7 514 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 ENOX1Q8TC92 643 aaKnown RBP12.07□□□□□ -0.48
UBR4-211ENST00000467272 NCSTNQ92542 709 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 SH3KBP1Q96B97 665 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 AHCYL2Q96HN2 611 aaKnown RBP12.07□□□□□ -0.48
UBR4-211ENST00000467272 C9orf72Q96LT7 481 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 HERPUD2Q9BSE4 406 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 SEMA5BQ9P283 1151 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 PCSK1NQ9UHG2 260 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 CROTQ9UKG9 612 aa12.07□□□□□ -0.48
UBR4-211ENST00000467272 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 LRRC10BA6NIK2 292 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 MKRN2OSH3BPM6 223 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 SEMA7AO75326 666 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 RFPL1O75677 317 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 SORBS2O94875 1100 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 FGF5P12034 268 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 F3P13726 295 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 CTPS1P17812 591 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 XRCC1P18887 633 aaPredicted RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 GNLYP22749 145 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 NFKBIAP25963 317 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 IL1R2P27930 398 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 GFERP55789 205 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 MAXP61244 160 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 NFATC2Q13469 925 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 ZNF235Q14590 738 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 IL11RAQ14626 422 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 HENMT1Q5T8I9 393 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 ARMC12Q5T9G4 340 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 C16orf46Q6P387 395 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 DCUN1D2Q6PH85 259 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 C6orf15Q6UXA7 325 aaPredicted RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 USP45Q70EL2 814 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 LYSMD3Q7Z3D4 306 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 POLNQ7Z5Q5 900 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 PDCD6IPQ8WUM4 868 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 RIOK2Q9BVS4 552 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 ZNF768Q9H5H4 540 aaKnown RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 PARVAQ9NVD7 372 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 SCHIP1Q9P0W5 487 aaPredicted RBP12.06□□□□□ -0.48
UBR4-211ENST00000467272 CPNE7Q9UBL6 633 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 POLHQ9Y253 713 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 PRKAB1Q9Y478 270 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 MAP4K5Q9Y4K4 846 aa12.06□□□□□ -0.48
UBR4-211ENST00000467272 OR5K4A6NMS3 321 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 FADS2P1A8MWK0 482 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PES1O00541 588 aaKnown RBP12.05□□□□□ -0.48
UBR4-211ENST00000467272 ATP1A1P05023 1023 aaKnown RBP12.05□□□□□ -0.48
UBR4-211ENST00000467272 TCF4P15884 667 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 IL4RP24394 825 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PSMA2P25787 234 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PCK1P35558 622 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 DLSTP36957 453 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SH3BP2P78314 561 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SEMA5AQ13591 1074 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SYCP1Q15431 976 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBR4-211ENST00000467272 PPP6R3Q5H9R7 873 aaPredicted RBP12.05□□□□□ -0.48
UBR4-211ENST00000467272 KDELC2Q7Z4H8 507 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PRSS42Q7Z5A4 293 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SLC9B2Q86UD5 537 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PLXDC1Q8IUK5 500 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 GALNT6Q8NCL4 622 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 KLHL6Q8WZ60 621 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 CSPG4P5Q96PW8 444 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 PLEKHG4BQ96PX9 1271 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 TRIM55Q9BYV6 548 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.05□□□□□ -0.48
UBR4-211ENST00000467272 ULBP3Q9BZM4 244 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 RMI1Q9H9A7 625 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 CUEDC1Q9NWM3 386 aaPredicted RBP12.05□□□□□ -0.48
UBR4-211ENST00000467272 DACH1Q9UI36 760 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SLC30A1Q9Y6M5 507 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 SHANK1Q9Y566 2161 aa12.05□□□□□ -0.48
UBR4-211ENST00000467272 CHUKO15111 745 aa12.04□□□□□ -0.48
UBR4-211ENST00000467272 DAPK3O43293 454 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms